8OIN

55S mammalian mitochondrial ribosome with mtRF1 and P-site tRNA


Experimental Data Snapshot

  • Method: ELECTRON MICROSCOPY
  • Resolution: 3.60 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 

wwPDB Validation   3D Report Full Report


This is version 2.1 of the entry. See complete history


Literature

Molecular basis of translation termination at noncanonical stop codons in human mitochondria.

Saurer, M.Leibundgut, M.Nadimpalli, H.P.Scaiola, A.Schonhut, T.Lee, R.G.Siira, S.J.Rackham, O.Dreos, R.Lenarcic, T.Kummer, E.Gatfield, D.Filipovska, A.Ban, N.

(2023) Science 380: 531-536

  • DOI: https://doi.org/10.1126/science.adf9890
  • Primary Citation of Related Structures:  
    8OIN, 8OIP, 8OIQ, 8OIR, 8OIS, 8OIT

  • PubMed Abstract: 

    The genetic code that specifies the identity of amino acids incorporated into proteins during protein synthesis is almost universally conserved. Mitochondrial genomes feature deviations from the standard genetic code, including the reassignment of two arginine codons to stop codons. The protein required for translation termination at these noncanonical stop codons to release the newly synthesized polypeptides is not currently known. In this study, we used gene editing and ribosomal profiling in combination with cryo-electron microscopy to establish that mitochondrial release factor 1 (mtRF1) detects noncanonical stop codons in human mitochondria by a previously unknown mechanism of codon recognition. We discovered that binding of mtRF1 to the decoding center of the ribosome stabilizes a highly unusual conformation in the messenger RNA in which the ribosomal RNA participates in specific recognition of the noncanonical stop codons.


  • Organizational Affiliation

    Department of Biology, Institute of Molecular Biology and Biophysics, ETH Zürich, 8093 Zürich, Switzerland.


Macromolecules

Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
Mitochondrial ribosomal protein L12198Sus scrofaMutation(s): 0 
UniProt
Find proteins for A0A4X1U6S6 (Sus scrofa)
Explore A0A4X1U6S6 
Go to UniProtKB:  A0A4X1U6S6
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupA0A4X1U6S6
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 5
MoleculeChains Sequence LengthOrganismDetailsImage
uL22mJ [auth BA]210Sus scrofaMutation(s): 0 
UniProt
Find proteins for A0A4X1TXR4 (Sus scrofa)
Explore A0A4X1TXR4 
Go to UniProtKB:  A0A4X1TXR4
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupA0A4X1TXR4
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 6
MoleculeChains Sequence LengthOrganismDetailsImage
39S ribosomal protein L23, mitochondrialK [auth BB]150Sus scrofaMutation(s): 0 
UniProt
Find proteins for A0A480JJI1 (Sus scrofa)
Explore A0A480JJI1 
Go to UniProtKB:  A0A480JJI1
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupA0A480JJI1
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 7
MoleculeChains Sequence LengthOrganismDetailsImage
uL24mL [auth BC]216Sus scrofaMutation(s): 0 
UniProt
Find proteins for F1RHJ1 (Sus scrofa)
Explore F1RHJ1 
Go to UniProtKB:  F1RHJ1
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupF1RHJ1
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 8
MoleculeChains Sequence LengthOrganismDetailsImage
Mitochondrial ribosomal protein L27M [auth BD]148Sus scrofaMutation(s): 0 
UniProt
Find proteins for A0A4X1U0F6 (Sus scrofa)
Explore A0A4X1U0F6 
Go to UniProtKB:  A0A4X1U0F6
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupA0A4X1U0F6
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 9
MoleculeChains Sequence LengthOrganismDetailsImage
Mitochondrial ribosomal protein L28N [auth BE]256Sus scrofaMutation(s): 0 
UniProt
Find proteins for A0A286ZTW8 (Sus scrofa)
Explore A0A286ZTW8 
Go to UniProtKB:  A0A286ZTW8
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupA0A286ZTW8
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 10
MoleculeChains Sequence LengthOrganismDetailsImage
Mitochondrial ribosomal protein L47O [auth BF]250Sus scrofaMutation(s): 0 
UniProt
Find proteins for F1SGC7 (Sus scrofa)
Explore F1SGC7 
Go to UniProtKB:  F1SGC7
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupF1SGC7
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 11
MoleculeChains Sequence LengthOrganismDetailsImage
uL30mP [auth BG]161Sus scrofaMutation(s): 0 
UniProt
Find proteins for A0A8D1MIP3 (Sus scrofa)
Explore A0A8D1MIP3 
Go to UniProtKB:  A0A8D1MIP3
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupA0A8D1MIP3
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 12
MoleculeChains Sequence LengthOrganismDetailsImage
Mitochondrial ribosomal protein L32Q [auth BH]207Sus scrofaMutation(s): 0 
UniProt
Find proteins for I3LTC4 (Sus scrofa)
Explore I3LTC4 
Go to UniProtKB:  I3LTC4
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupI3LTC4
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 13
MoleculeChains Sequence LengthOrganismDetailsImage
bL33mR [auth BI]65Sus scrofaMutation(s): 0 
UniProt
Find proteins for A0A4X1TLP9 (Sus scrofa)
Explore A0A4X1TLP9 
Go to UniProtKB:  A0A4X1TLP9
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupA0A4X1TLP9
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 14
MoleculeChains Sequence LengthOrganismDetailsImage
Mitochondrial ribosomal protein L34S [auth BJ]95Sus scrofaMutation(s): 0 
UniProt
Find proteins for A0A4X1UFR4 (Sus scrofa)
Explore A0A4X1UFR4 
Go to UniProtKB:  A0A4X1UFR4
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupA0A4X1UFR4
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 15
MoleculeChains Sequence LengthOrganismDetailsImage
Mitochondrial ribosomal protein L35T [auth BK]188Sus scrofaMutation(s): 0 
UniProt
Find proteins for F1SVC5 (Sus scrofa)
Explore F1SVC5 
Go to UniProtKB:  F1SVC5
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupF1SVC5
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 16
MoleculeChains Sequence LengthOrganismDetailsImage
uL2mU [auth BL]306Sus scrofaMutation(s): 0 
UniProt
Find proteins for F1RRN2 (Sus scrofa)
Explore F1RRN2 
Go to UniProtKB:  F1RRN2
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupF1RRN2
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 17
MoleculeChains Sequence LengthOrganismDetailsImage
ICT1V [auth BM]399Sus scrofaMutation(s): 0 
UniProt
Find proteins for A0A140UHW4 (Sus scrofa)
Explore A0A140UHW4 
Go to UniProtKB:  A0A140UHW4
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupA0A140UHW4
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 18
MoleculeChains Sequence LengthOrganismDetailsImage
Mitochondrial ribosomal protein L4W [auth BN]294Sus scrofaMutation(s): 0 
UniProt
Find proteins for A0A287B9C4 (Sus scrofa)
Explore A0A287B9C4 
Go to UniProtKB:  A0A287B9C4
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupA0A287B9C4
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 19
MoleculeChains Sequence LengthOrganismDetailsImage
Mitochondrial ribosomal protein L9X [auth BO]268Sus scrofaMutation(s): 0 
UniProt
Find proteins for I3LR45 (Sus scrofa)
Explore I3LR45 
Go to UniProtKB:  I3LR45
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupI3LR45
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 20
MoleculeChains Sequence LengthOrganismDetailsImage
Mitochondrial ribosomal protein L10Y [auth BP]257Sus scrofaMutation(s): 0 
UniProt
Find proteins for F1RWJ0 (Sus scrofa)
Explore F1RWJ0 
Go to UniProtKB:  F1RWJ0
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupF1RWJ0
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 21
MoleculeChains Sequence LengthOrganismDetailsImage
Mitochondrial ribosomal protein L11Z [auth BQ]192Sus scrofaMutation(s): 0 
UniProt
Find proteins for F1RU54 (Sus scrofa)
Explore F1RU54 
Go to UniProtKB:  F1RU54
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupF1RU54
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 22
MoleculeChains Sequence LengthOrganismDetailsImage
39S ribosomal protein L13, mitochondrialAA [auth BR]197Sus scrofaMutation(s): 0 
UniProt
Find proteins for K7GP19 (Sus scrofa)
Explore K7GP19 
Go to UniProtKB:  K7GP19
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupK7GP19
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 23
MoleculeChains Sequence LengthOrganismDetailsImage
Mitochondrial ribosomal protein L14BA [auth BS]325Sus scrofaMutation(s): 0 
UniProt
Find proteins for A0A287BMZ6 (Sus scrofa)
Explore A0A287BMZ6 
Go to UniProtKB:  A0A287BMZ6
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupA0A287BMZ6
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 24
MoleculeChains Sequence LengthOrganismDetailsImage
39S ribosomal protein L15, mitochondrialCA [auth BT]296Sus scrofaMutation(s): 0 
UniProt
Find proteins for A0A8D0HMG9 (Sus scrofa)
Explore A0A8D0HMG9 
Go to UniProtKB:  A0A8D0HMG9
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupA0A8D0HMG9
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 25
MoleculeChains Sequence LengthOrganismDetailsImage
uL16mDA [auth BU]251Sus scrofaMutation(s): 0 
UniProt
Find proteins for F1RI89 (Sus scrofa)
Explore F1RI89 
Go to UniProtKB:  F1RI89
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupF1RI89
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 26
MoleculeChains Sequence LengthOrganismDetailsImage
bL17mEA [auth BV]169Sus scrofaMutation(s): 0 
UniProt
Find proteins for F1RMQ4 (Sus scrofa)
Explore F1RMQ4 
Go to UniProtKB:  F1RMQ4
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupF1RMQ4
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 27
MoleculeChains Sequence LengthOrganismDetailsImage
Mitochondrial ribosomal protein L18FA [auth BW]188Sus scrofaMutation(s): 0 
UniProt
Find proteins for A0A4X1VX01 (Sus scrofa)
Explore A0A4X1VX01 
Go to UniProtKB:  A0A4X1VX01
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupA0A4X1VX01
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 28
MoleculeChains Sequence LengthOrganismDetailsImage
39S ribosomal protein L19, mitochondrialGA [auth BX]303Sus scrofaMutation(s): 0 
UniProt
Find proteins for I3LNJ0 (Sus scrofa)
Explore I3LNJ0 
Go to UniProtKB:  I3LNJ0
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupI3LNJ0
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 29
MoleculeChains Sequence LengthOrganismDetailsImage
Mitochondrial ribosomal protein L20HA [auth BY]149Sus scrofaMutation(s): 0 
UniProt
Find proteins for A0A286ZU56 (Sus scrofa)
Explore A0A286ZU56 
Go to UniProtKB:  A0A286ZU56
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupA0A286ZU56
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 30
MoleculeChains Sequence LengthOrganismDetailsImage
Mitochondrial ribosomal protein L21IA [auth BZ]209Sus scrofaMutation(s): 0 
UniProt
Find proteins for F1RY70 (Sus scrofa)
Explore F1RY70 
Go to UniProtKB:  F1RY70
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupF1RY70
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 31
MoleculeChains Sequence LengthOrganismDetailsImage
39S ribosomal protein L52, mitochondrialJA [auth Ba]160Sus scrofaMutation(s): 0 
UniProt
Find proteins for F1S9B7 (Sus scrofa)
Explore F1S9B7 
Go to UniProtKB:  F1S9B7
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupF1S9B7
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 32
MoleculeChains Sequence LengthOrganismDetailsImage
Mitochondrial ribosomal protein L53KA [auth Bb]112Sus scrofaMutation(s): 0 
UniProt
Find proteins for A0A8D0LKT0 (Sus scrofa)
Explore A0A8D0LKT0 
Go to UniProtKB:  A0A8D0LKT0
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupA0A8D0LKT0
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 33
MoleculeChains Sequence LengthOrganismDetailsImage
mL54LA [auth Bc]138Sus scrofaMutation(s): 0 
UniProt
Find proteins for I3LN63 (Sus scrofa)
Explore I3LN63 
Go to UniProtKB:  I3LN63
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupI3LN63
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 34
MoleculeChains Sequence LengthOrganismDetailsImage
bL31mMA [auth Bd]126Sus scrofaMutation(s): 0 
UniProt
Find proteins for A0A4X1ULI6 (Sus scrofa)
Explore A0A4X1ULI6 
Go to UniProtKB:  A0A4X1ULI6
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupA0A4X1ULI6
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 35
MoleculeChains Sequence LengthOrganismDetailsImage
Mitochondrial ribosomal protein L57NA [auth Be]102Sus scrofaMutation(s): 0 
UniProt
Find proteins for A0A287BP93 (Sus scrofa)
Explore A0A287BP93 
Go to UniProtKB:  A0A287BP93
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupA0A287BP93
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 36
MoleculeChains Sequence LengthOrganismDetailsImage
mL62 (ICT1)OA [auth Bf]205Sus scrofaMutation(s): 0 
UniProt
Find proteins for A0A286ZJR2 (Sus scrofa)
Explore A0A286ZJR2 
Go to UniProtKB:  A0A286ZJR2
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupA0A286ZJR2
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 37
MoleculeChains Sequence LengthOrganismDetailsImage
mL64PA [auth Bg]222Sus scrofaMutation(s): 0 
UniProt
Find proteins for A0A286ZXA6 (Sus scrofa)
Explore A0A286ZXA6 
Go to UniProtKB:  A0A286ZXA6
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupA0A286ZXA6
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 38
MoleculeChains Sequence LengthOrganismDetailsImage
Mitochondrial ribosomal protein S18AQA [auth Bh]196Sus scrofaMutation(s): 0 
UniProt
Find proteins for F1RRH6 (Sus scrofa)
Explore F1RRH6 
Go to UniProtKB:  F1RRH6
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupF1RRH6
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 39
MoleculeChains Sequence LengthOrganismDetailsImage
39S ribosomal protein S30, mitochondrialRA [auth Bi]433Sus scrofaMutation(s): 0 
UniProt
Find proteins for A0A480QIM3 (Sus scrofa)
Explore A0A480QIM3 
Go to UniProtKB:  A0A480QIM3
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupA0A480QIM3
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 40
MoleculeChains Sequence LengthOrganismDetailsImage
39S ribosomal protein L1, mitochondrialSA [auth Bj]304Sus scrofaMutation(s): 0 
UniProt
Find proteins for A0A287AF82 (Sus scrofa)
Explore A0A287AF82 
Go to UniProtKB:  A0A287AF82
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupA0A287AF82
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 41
MoleculeChains Sequence LengthOrganismDetailsImage
Ribosomal proteinTA [auth Bl]100Sus scrofaMutation(s): 0 
UniProt
Find proteins for A0A287A731 (Sus scrofa)
Explore A0A287A731 
Go to UniProtKB:  A0A287A731
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupA0A287A731
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 42
MoleculeChains Sequence LengthOrganismDetailsImage
Mitochondrial ribosomal protein L37UA [auth Bm]423Sus scrofaMutation(s): 0 
UniProt
Find proteins for A0A287BIV6 (Sus scrofa)
Explore A0A287BIV6 
Go to UniProtKB:  A0A287BIV6
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupA0A287BIV6
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 43
MoleculeChains Sequence LengthOrganismDetailsImage
Mitochondrial ribosomal protein L38VA [auth Bn]380Sus scrofaMutation(s): 0 
UniProt
Find proteins for F1RW03 (Sus scrofa)
Explore F1RW03 
Go to UniProtKB:  F1RW03
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupF1RW03
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 44
MoleculeChains Sequence LengthOrganismDetailsImage
Mitochondrial ribosomal protein L39WA [auth Bo]334Sus scrofaMutation(s): 0 
UniProt
Find proteins for F1SHP6 (Sus scrofa)
Explore F1SHP6 
Go to UniProtKB:  F1SHP6
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupF1SHP6
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 45
MoleculeChains Sequence LengthOrganismDetailsImage
Mitochondrial ribosomal protein L40XA [auth Bp]162Sus scrofaMutation(s): 0 
UniProt
Find proteins for A0A286ZP98 (Sus scrofa)
Explore A0A286ZP98 
Go to UniProtKB:  A0A286ZP98
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupA0A286ZP98
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 46
MoleculeChains Sequence LengthOrganismDetailsImage
Mitochondrial ribosomal protein L41YA [auth Bq]135Sus scrofaMutation(s): 0 
UniProt
Find proteins for A0A8D1F1K9 (Sus scrofa)
Explore A0A8D1F1K9 
Go to UniProtKB:  A0A8D1F1K9
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupA0A8D1F1K9
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 47
MoleculeChains Sequence LengthOrganismDetailsImage
mL42ZA [auth Br]142Sus scrofaMutation(s): 0 
UniProt
Find proteins for A0A287BQA1 (Sus scrofa)
Explore A0A287BQA1 
Go to UniProtKB:  A0A287BQA1
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupA0A287BQA1
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 48
MoleculeChains Sequence LengthOrganismDetailsImage
39S ribosomal protein L43, mitochondrial isoform X2AB [auth Bs]159Sus scrofaMutation(s): 0 
UniProt
Find proteins for F1S8U4 (Sus scrofa)
Explore F1S8U4 
Go to UniProtKB:  F1S8U4
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupF1S8U4
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 49
MoleculeChains Sequence LengthOrganismDetailsImage
mL44BB [auth Bt]332Sus scrofaMutation(s): 0 
UniProt
Find proteins for F1SR64 (Sus scrofa)
Explore F1SR64 
Go to UniProtKB:  F1SR64
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupF1SR64
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 50
MoleculeChains Sequence LengthOrganismDetailsImage
Mitochondrial ribosomal protein L45CB [auth Bu]306Sus scrofaMutation(s): 0 
UniProt
Find proteins for I3LGM5 (Sus scrofa)
Explore I3LGM5 
Go to UniProtKB:  I3LGM5
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupI3LGM5
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 51
MoleculeChains Sequence LengthOrganismDetailsImage
Mitochondrial ribosomal protein L46DB [auth Bv]279Sus scrofaMutation(s): 0 
UniProt
Find proteins for F1SRT0 (Sus scrofa)
Explore F1SRT0 
Go to UniProtKB:  F1SRT0
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupF1SRT0
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 52
MoleculeChains Sequence LengthOrganismDetailsImage
39S ribosomal protein L48, mitochondrialEB [auth Bw]269Sus scrofaMutation(s): 0 
UniProt
Find proteins for A0A480J9Z6 (Sus scrofa)
Explore A0A480J9Z6 
Go to UniProtKB:  A0A480J9Z6
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupA0A480J9Z6
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 53
MoleculeChains Sequence LengthOrganismDetailsImage
Mrpl34FB [auth Bx]166Sus scrofaMutation(s): 0 
UniProt
Find proteins for A0A0R4J8D6 (Sus scrofa)
Explore A0A0R4J8D6 
Go to UniProtKB:  A0A0R4J8D6
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupA0A0R4J8D6
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 54
MoleculeChains Sequence LengthOrganismDetailsImage
Mitochondrial ribosomal protein L50GB [auth By]198Sus scrofaMutation(s): 0 
UniProt
Find proteins for I3L9H6 (Sus scrofa)
Explore I3L9H6 
Go to UniProtKB:  I3L9H6
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupI3L9H6
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 55
MoleculeChains Sequence LengthOrganismDetailsImage
Mitochondrial ribosomal protein L51HB [auth Bz]128Sus scrofaMutation(s): 0 
UniProt
Find proteins for A0A8D1P1C8 (Sus scrofa)
Explore A0A8D1P1C8 
Go to UniProtKB:  A0A8D1P1C8
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupA0A8D1P1C8
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 57
MoleculeChains Sequence LengthOrganismDetailsImage
28S ribosomal protein S35, mitochondrial isoform 1JB [auth AB]366Sus scrofaMutation(s): 0 
UniProt
Find proteins for F1SG95 (Sus scrofa)
Explore F1SG95 
Go to UniProtKB:  F1SG95
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupF1SG95
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 58
MoleculeChains Sequence LengthOrganismDetailsImage
Mitochondrial ribosomal protein S24KB [auth AC]167Sus scrofaMutation(s): 0 
UniProt
Find proteins for A0A287ANU4 (Sus scrofa)
Explore A0A287ANU4 
Go to UniProtKB:  A0A287ANU4
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupA0A287ANU4
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 59
MoleculeChains Sequence LengthOrganismDetailsImage
Aurora kinase A interacting protein 1LB [auth AD]199Sus scrofaMutation(s): 0 
UniProt
Find proteins for A0A8D2A802 (Sus scrofa)
Explore A0A8D2A802 
Go to UniProtKB:  A0A8D2A802
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupA0A8D2A802
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 60
MoleculeChains Sequence LengthOrganismDetailsImage
Mitoribosomal protein bs6m, mrps6MB [auth AE]124Sus scrofaMutation(s): 0 
UniProt
Find proteins for A0A5K1V0G5 (Sus scrofa)
Explore A0A5K1V0G5 
Go to UniProtKB:  A0A5K1V0G5
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupA0A5K1V0G5
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 61
MoleculeChains Sequence LengthOrganismDetailsImage
Mitochondrial ribosomal protein S7NB [auth AF]242Sus scrofaMutation(s): 0 
UniProt
Find proteins for A0A286ZJ25 (Sus scrofa)
Explore A0A286ZJ25 
Go to UniProtKB:  A0A286ZJ25
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupA0A286ZJ25
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 63
MoleculeChains Sequence LengthOrganismDetailsImage
Mitochondrial ribosomal protein S10PB [auth AH]200Sus scrofaMutation(s): 0 
UniProt
Find proteins for F1RUU2 (Sus scrofa)
Explore F1RUU2 
Go to UniProtKB:  F1RUU2
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupF1RUU2
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 65
MoleculeChains Sequence LengthOrganismDetailsImage
Mitochondrial ribosomal protein S12RB [auth AJ]139Sus scrofaMutation(s): 0 
UniProt
Find proteins for A0A0M3KL52 (Sus scrofa)
Explore A0A0M3KL52 
Go to UniProtKB:  A0A0M3KL52
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupA0A0M3KL52
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 66
MoleculeChains Sequence LengthOrganismDetailsImage
Mitochondrial ribosomal protein S14SB [auth AK]128Sus scrofaMutation(s): 0 
UniProt
Find proteins for A0A0M3KL53 (Sus scrofa)
Explore A0A0M3KL53 
Go to UniProtKB:  A0A0M3KL53
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupA0A0M3KL53
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 67
MoleculeChains Sequence LengthOrganismDetailsImage
28S ribosomal protein S15, mitochondrialTB [auth AL]259Sus scrofaMutation(s): 0 
UniProt
Find proteins for A0A287AKS1 (Sus scrofa)
Explore A0A287AKS1 
Go to UniProtKB:  A0A287AKS1
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupA0A287AKS1
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 68
MoleculeChains Sequence LengthOrganismDetailsImage
28S ribosomal protein S16, mitochondrialUB [auth AM]135Sus scrofaMutation(s): 0 
UniProt
Find proteins for A0A480JTD7 (Sus scrofa)
Explore A0A480JTD7 
Go to UniProtKB:  A0A480JTD7
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupA0A480JTD7
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 69
MoleculeChains Sequence LengthOrganismDetailsImage
uS17mVB [auth AN]130Sus scrofaMutation(s): 0 
UniProt
Find proteins for A0A8D1UDM1 (Sus scrofa)
Explore A0A8D1UDM1 
Go to UniProtKB:  A0A8D1UDM1
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupA0A8D1UDM1
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 70
MoleculeChains Sequence LengthOrganismDetailsImage
28S ribosomal protein S18b, mitochondrialWB [auth AO]258Sus scrofaMutation(s): 0 
UniProt
Find proteins for Q767K8 (Sus scrofa)
Explore Q767K8 
Go to UniProtKB:  Q767K8
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ767K8
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 71
MoleculeChains Sequence LengthOrganismDetailsImage
Mitochondrial ribosomal protein S18CXB [auth AP]143Sus scrofaMutation(s): 0 
UniProt
Find proteins for A0A0M3KL54 (Sus scrofa)
Explore A0A0M3KL54 
Go to UniProtKB:  A0A0M3KL54
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupA0A0M3KL54
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 72
MoleculeChains Sequence LengthOrganismDetailsImage
28S ribosomal protein S21, mitochondrialYB [auth AQ]87Sus scrofaMutation(s): 0 
UniProt
Find proteins for A0A286ZNB3 (Sus scrofa)
Explore A0A286ZNB3 
Go to UniProtKB:  A0A286ZNB3
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupA0A286ZNB3
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 73
MoleculeChains Sequence LengthOrganismDetailsImage
Mitochondrial ribosomal protein S22ZB [auth AR]382Sus scrofaMutation(s): 0 
UniProt
Find proteins for A0A287AQT5 (Sus scrofa)
Explore A0A287AQT5 
Go to UniProtKB:  A0A287AQT5
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupA0A287AQT5
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 74
MoleculeChains Sequence LengthOrganismDetailsImage
mS23AC [auth AS]190Sus scrofaMutation(s): 0 
UniProt
Find proteins for A0A287AEW3 (Sus scrofa)
Explore A0A287AEW3 
Go to UniProtKB:  A0A287AEW3
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupA0A287AEW3
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 75
MoleculeChains Sequence LengthOrganismDetailsImage
Mitochondrial ribosomal protein S25BC [auth AT]173Sus scrofaMutation(s): 0 
UniProt
Find proteins for A0A0M3KL55 (Sus scrofa)
Explore A0A0M3KL55 
Go to UniProtKB:  A0A0M3KL55
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupA0A0M3KL55
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 76
MoleculeChains Sequence LengthOrganismDetailsImage
Mitochondrial ribosomal protein S26CC [auth AU]205Sus scrofaMutation(s): 0 
UniProt
Find proteins for A0A287AY01 (Sus scrofa)
Explore A0A287AY01 
Go to UniProtKB:  A0A287AY01
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupA0A287AY01
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 77
MoleculeChains Sequence LengthOrganismDetailsImage
Mitochondrial ribosomal protein S27DC [auth AV]395Sus scrofaMutation(s): 0 
UniProt
Find proteins for A0A5G2R1I0 (Sus scrofa)
Explore A0A5G2R1I0 
Go to UniProtKB:  A0A5G2R1I0
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupA0A5G2R1I0
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 78
MoleculeChains Sequence LengthOrganismDetailsImage
Mitoribosomal protein ms28, mrps28EC [auth AW]188Sus scrofaMutation(s): 0 
UniProt
Find proteins for A0A0M3KL56 (Sus scrofa)
Explore A0A0M3KL56 
Go to UniProtKB:  A0A0M3KL56
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupA0A0M3KL56
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 79
MoleculeChains Sequence LengthOrganismDetailsImage
Death associated protein 3FC [auth AX]410Sus scrofaMutation(s): 0 
UniProt
Find proteins for A0A8D1XNL0 (Sus scrofa)
Explore A0A8D1XNL0 
Go to UniProtKB:  A0A8D1XNL0
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupA0A8D1XNL0
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 80
MoleculeChains Sequence LengthOrganismDetailsImage
28S ribosomal protein S31, mitochondrialGC [auth AY]381Sus scrofaMutation(s): 0 
UniProt
Find proteins for F1RME2 (Sus scrofa)
Explore F1RME2 
Go to UniProtKB:  F1RME2
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupF1RME2
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 81
MoleculeChains Sequence LengthOrganismDetailsImage
Mitochondrial ribosomal protein S33HC [auth AZ]148Sus scrofaMutation(s): 0 
UniProt
Find proteins for A0A4X1V2H3 (Sus scrofa)
Explore A0A4X1V2H3 
Go to UniProtKB:  A0A4X1V2H3
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupA0A4X1V2H3
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 82
MoleculeChains Sequence LengthOrganismDetailsImage
Peptide chain release factor 1, mitochondrialIC [auth Aa]474Homo sapiensMutation(s): 0 
Gene Names: MTRF1
UniProt & NIH Common Fund Data Resources
Find proteins for O75570 (Homo sapiens)
Explore O75570 
Go to UniProtKB:  O75570
PHAROS:  O75570
GTEx:  ENSG00000120662 
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupO75570
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 83
MoleculeChains Sequence LengthOrganismDetailsImage
Mitochondrial ribosomal protein S2JC [auth Ab]289Sus scrofaMutation(s): 0 
UniProt
Find proteins for F1S001 (Sus scrofa)
Explore F1S001 
Go to UniProtKB:  F1S001
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupF1S001
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 84
MoleculeChains Sequence LengthOrganismDetailsImage
Coiled-coil-helix-coiled-coil-helix domain containing 1KC [auth Ac]118Sus scrofaMutation(s): 0 
UniProt
Find proteins for A0A4X1SZV4 (Sus scrofa)
Explore A0A4X1SZV4 
Go to UniProtKB:  A0A4X1SZV4
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupA0A4X1SZV4
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 85
MoleculeChains Sequence LengthOrganismDetailsImage
28S ribosomal protein S5, mitochondrial isoform X2LC [auth Ad]430Sus scrofaMutation(s): 0 
UniProt
Find proteins for F1SU66 (Sus scrofa)
Explore F1SU66 
Go to UniProtKB:  F1SU66
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupF1SU66
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 86
MoleculeChains Sequence LengthOrganismDetailsImage
mS39MC [auth Ae]692Sus scrofaMutation(s): 0 
UniProt
Find proteins for K7GKS8 (Sus scrofa)
Explore K7GKS8 
Go to UniProtKB:  K7GKS8
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupK7GKS8
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 87
MoleculeChains Sequence LengthOrganismDetailsImage
uS9mNC [auth Ag]397Sus scrofaMutation(s): 0 
UniProt
Find proteins for I3LU08 (Sus scrofa)
Explore I3LU08 
Go to UniProtKB:  I3LU08
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupI3LU08
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 88
MoleculeChains Sequence LengthOrganismDetailsImage
Mitochondrial ribosomal protein S11OC [auth Ai]196Sus scrofaMutation(s): 0 
UniProt
Find proteins for A0A286ZJJ6 (Sus scrofa)
Explore A0A286ZJJ6 
Go to UniProtKB:  A0A286ZJJ6
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupA0A286ZJJ6
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 89
MoleculeChains Sequence LengthOrganismDetailsImage
Mitochondrial ribosomal protein S34PC [auth Aj]505Sus scrofaMutation(s): 0 
UniProt
Find proteins for A0A287AVS9 (Sus scrofa)
Explore A0A287AVS9 
Go to UniProtKB:  A0A287AVS9
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupA0A287AVS9
Sequence Annotations
Expand
  • Reference Sequence

Find similar nucleic acids by:  Sequence   |   3D Structure  

Entity ID: 2
MoleculeChains LengthOrganismImage
E-site tRNAG [auth B7]3Sus scrofa
Sequence Annotations
Expand
  • Reference Sequence
Find similar nucleic acids by:  (by identity cutoff)  |  3D Structure
Entity ID: 3
MoleculeChains LengthOrganismImage
16S rRNAH [auth B8]1,571Sus scrofa
Sequence Annotations
Expand
  • Reference Sequence
Find similar nucleic acids by:  (by identity cutoff)  |  3D Structure
Entity ID: 4
MoleculeChains LengthOrganismImage
CP Phe-tRNAI [auth B9]73Sus scrofa
Sequence Annotations
Expand
  • Reference Sequence
Find similar nucleic acids by:  (by identity cutoff)  |  3D Structure
Entity ID: 56
MoleculeChains LengthOrganismImage
12S rRNAIB [auth AA]960Sus scrofa
Sequence Annotations
Expand
  • Reference Sequence
Find similar nucleic acids by:  (by identity cutoff)  |  3D Structure
Entity ID: 62
MoleculeChains LengthOrganismImage
P-site Met-tRNA(fMet)OB [auth AG]71Homo sapiens
Sequence Annotations
Expand
  • Reference Sequence

Find similar nucleic acids by:  Sequence   |   3D Structure  

Entity ID: 64
MoleculeChains LengthOrganismImage
mRNAQB [auth AI]9Homo sapiens
Sequence Annotations
Expand
  • Reference Sequence
Small Molecules
Ligands 10 Unique
IDChains Name / Formula / InChI Key2D Diagram3D Interactions
ATP
Query on ATP

Download Ideal Coordinates CCD File 
HR [auth AX]ADENOSINE-5'-TRIPHOSPHATE
C10 H16 N5 O13 P3
ZKHQWZAMYRWXGA-KQYNXXCUSA-N
GDP
Query on GDP

Download Ideal Coordinates CCD File 
JR [auth AX]GUANOSINE-5'-DIPHOSPHATE
C10 H15 N5 O11 P2
QGWNDRXFNXRZMB-UUOKFMHZSA-N
SPM
Query on SPM

Download Ideal Coordinates CCD File 
KQ [auth AA]SPERMINE
C10 H26 N4
PFNFFQXMRSDOHW-UHFFFAOYSA-N
FME
Query on FME

Download Ideal Coordinates CCD File 
AR [auth AG]N-FORMYLMETHIONINE
C6 H11 N O3 S
PYUSHNKNPOHWEZ-YFKPBYRVSA-N
FES
Query on FES

Download Ideal Coordinates CCD File 
FR [auth AP],
GR [auth AT],
QL [auth Bh]
FE2/S2 (INORGANIC) CLUSTER
Fe2 S2
NIXDOXVAJZFRNF-UHFFFAOYSA-N
PHE
Query on PHE

Download Ideal Coordinates CCD File 
ZK [auth B9]PHENYLALANINE
C9 H11 N O2
COLNVLDHVKWLRT-QMMMGPOBSA-N
SPD
Query on SPD

Download Ideal Coordinates CCD File 
LQ [auth AA]SPERMIDINE
C7 H19 N3
ATHGHQPFGPMSJY-UHFFFAOYSA-N
ZN
Query on ZN

Download Ideal Coordinates CCD File 
BL [auth BH],
ER [auth AO],
RL [auth Bl]
ZINC ION
Zn
PTFCDOFLOPIGGS-UHFFFAOYSA-N
K
Query on K

Download Ideal Coordinates CCD File 
AK [auth B8]
BK [auth B8]
CK [auth B8]
CL [auth BL]
DK [auth B8]
AK [auth B8],
BK [auth B8],
CK [auth B8],
CL [auth BL],
DK [auth B8],
EK [auth B8],
FK [auth B8],
GK [auth B8],
HK [auth B8],
IK [auth B8],
IL [auth BU],
JK [auth B8],
KK [auth B8],
LK [auth B8],
MK [auth B8],
ML [auth BW],
MQ [auth AA],
NK [auth B8],
NQ [auth AA],
OK [auth B8],
OQ [auth AA],
PK [auth B8],
PL [auth Be],
PQ [auth AA],
QK [auth B8],
QQ [auth AA],
RK [auth B8],
RQ [auth AA],
SK [auth B8],
SQ [auth AA],
TK [auth B8],
TQ [auth AA],
UL [auth Bz],
UQ [auth AA],
VJ [auth B8],
VQ [auth AA],
WJ [auth B8],
WQ [auth AA],
XJ [auth B8],
YJ [auth B8],
ZJ [auth B8]
POTASSIUM ION
K
NPYPAHLBTDXSSS-UHFFFAOYSA-N
MG
Query on MG

Download Ideal Coordinates CCD File 
AD [auth B8]
AE [auth B8]
AF [auth B8]
AG [auth B8]
AH [auth B8]
AD [auth B8],
AE [auth B8],
AF [auth B8],
AG [auth B8],
AH [auth B8],
AI [auth B8],
AJ [auth B8],
AL [auth B9],
AM [auth AA],
AN [auth AA],
AO [auth AA],
AP [auth AA],
AQ [auth AA],
BD [auth B8],
BE [auth B8],
BF [auth B8],
BG [auth B8],
BH [auth B8],
BI [auth B8],
BJ [auth B8],
BM [auth AA],
BN [auth AA],
BO [auth AA],
BP [auth AA],
BQ [auth AA],
BR [auth AG],
CD [auth B8],
CE [auth B8],
CF [auth B8],
CG [auth B8],
CH [auth B8],
CI [auth B8],
CJ [auth B8],
CM [auth AA],
CN [auth AA],
CO [auth AA],
CP [auth AA],
CQ [auth AA],
CR [auth AI],
DD [auth B8],
DE [auth B8],
DF [auth B8],
DG [auth B8],
DH [auth B8],
DI [auth B8],
DJ [auth B8],
DL [auth BL],
DM [auth AA],
DN [auth AA],
DO [auth AA],
DP [auth AA],
DQ [auth AA],
DR [auth AJ],
ED [auth B8],
EE [auth B8],
EF [auth B8],
EG [auth B8],
EH [auth B8],
EI [auth B8],
EJ [auth B8],
EL [auth BL],
EM [auth AA],
EN [auth AA],
EO [auth AA],
EP [auth AA],
EQ [auth AA],
FD [auth B8],
FE [auth B8],
FF [auth B8],
FG [auth B8],
FH [auth B8],
FI [auth B8],
FJ [auth B8],
FL [auth BM],
FM [auth AA],
FN [auth AA],
FO [auth AA],
FP [auth AA],
FQ [auth AA],
GD [auth B8],
GE [auth B8],
GF [auth B8],
GG [auth B8],
GH [auth B8],
GI [auth B8],
GJ [auth B8],
GL [auth BM],
GM [auth AA],
GN [auth AA],
GO [auth AA],
GP [auth AA],
GQ [auth AA],
HD [auth B8],
HE [auth B8],
HF [auth B8],
HG [auth B8],
HH [auth B8],
HI [auth B8],
HJ [auth B8],
HL [auth BT],
HM [auth AA],
HN [auth AA],
HO [auth AA],
HP [auth AA],
HQ [auth AA],
ID [auth B8],
IE [auth B8],
IF [auth B8],
IG [auth B8],
IH [auth B8],
II [auth B8],
IJ [auth B8],
IM [auth AA],
IN [auth AA],
IO [auth AA],
IP [auth AA],
IQ [auth AA],
IR [auth AX],
JD [auth B8],
JE [auth B8],
JF [auth B8],
JG [auth B8],
JH [auth B8],
JI [auth B8],
JJ [auth B8],
JL [auth BV],
JM [auth AA],
JN [auth AA],
JO [auth AA],
JP [auth AA],
JQ [auth AA],
KD [auth B8],
KE [auth B8],
KF [auth B8],
KG [auth B8],
KH [auth B8],
KI [auth B8],
KJ [auth B8],
KL [auth BV],
KM [auth AA],
KN [auth AA],
KO [auth AA],
KP [auth AA],
KR [auth Ab],
LD [auth B8],
LE [auth B8],
LF [auth B8],
LG [auth B8],
LH [auth B8],
LI [auth B8],
LJ [auth B8],
LL [auth BV],
LM [auth AA],
LN [auth AA],
LO [auth AA],
LP [auth AA],
MD [auth B8],
ME [auth B8],
MF [auth B8],
MG [auth B8],
MH [auth B8],
MI [auth B8],
MJ [auth B8],
MM [auth AA],
MN [auth AA],
MO [auth AA],
MP [auth AA],
ND [auth B8],
NE [auth B8],
NF [auth B8],
NG [auth B8],
NH [auth B8],
NI [auth B8],
NJ [auth B8],
NL [auth BY],
NM [auth AA],
NN [auth AA],
NO [auth AA],
NP [auth AA],
OD [auth B8],
OE [auth B8],
OF [auth B8],
OG [auth B8],
OH [auth B8],
OI [auth B8],
OJ [auth B8],
OL [auth Be],
OM [auth AA],
ON [auth AA],
OO [auth AA],
OP [auth AA],
PD [auth B8],
PE [auth B8],
PF [auth B8],
PG [auth B8],
PH [auth B8],
PI [auth B8],
PJ [auth B8],
PM [auth AA],
PN [auth AA],
PO [auth AA],
PP [auth AA],
QC [auth B8],
QD [auth B8],
QE [auth B8],
QF [auth B8],
QG [auth B8],
QH [auth B8],
QI [auth B8],
QJ [auth B8],
QM [auth AA],
QN [auth AA],
QO [auth AA],
QP [auth AA],
RC [auth B8],
RD [auth B8],
RE [auth B8],
RF [auth B8],
RG [auth B8],
RH [auth B8],
RI [auth B8],
RJ [auth B8],
RM [auth AA],
RN [auth AA],
RO [auth AA],
RP [auth AA],
SC [auth B8],
SD [auth B8],
SE [auth B8],
SF [auth B8],
SG [auth B8],
SH [auth B8],
SI [auth B8],
SJ [auth B8],
SL [auth Bq],
SM [auth AA],
SN [auth AA],
SO [auth AA],
SP [auth AA],
TC [auth B8],
TD [auth B8],
TE [auth B8],
TF [auth B8],
TG [auth B8],
TH [auth B8],
TI [auth B8],
TJ [auth B8],
TL [auth Bx],
TM [auth AA],
TN [auth AA],
TO [auth AA],
TP [auth AA],
UC [auth B8],
UD [auth B8],
UE [auth B8],
UF [auth B8],
UG [auth B8],
UH [auth B8],
UI [auth B8],
UJ [auth B8],
UK [auth B8],
UM [auth AA],
UN [auth AA],
UO [auth AA],
UP [auth AA],
VC [auth B8],
VD [auth B8],
VE [auth B8],
VF [auth B8],
VG [auth B8],
VH [auth B8],
VI [auth B8],
VK [auth B8],
VL [auth AA],
VM [auth AA],
VN [auth AA],
VO [auth AA],
VP [auth AA],
WC [auth B8],
WD [auth B8],
WE [auth B8],
WF [auth B8],
WG [auth B8],
WH [auth B8],
WI [auth B8],
WK [auth B8],
WL [auth AA],
WM [auth AA],
WN [auth AA],
WO [auth AA],
WP [auth AA],
XC [auth B8],
XD [auth B8],
XE [auth B8],
XF [auth B8],
XG [auth B8],
XH [auth B8],
XI [auth B8],
XK [auth B8],
XL [auth AA],
XM [auth AA],
XN [auth AA],
XO [auth AA],
XP [auth AA],
XQ [auth AA],
YC [auth B8],
YD [auth B8],
YE [auth B8],
YF [auth B8],
YG [auth B8],
YH [auth B8],
YI [auth B8],
YK [auth B8],
YL [auth AA],
YM [auth AA],
YN [auth AA],
YO [auth AA],
YP [auth AA],
YQ [auth AA],
ZC [auth B8],
ZD [auth B8],
ZE [auth B8],
ZF [auth B8],
ZG [auth B8],
ZH [auth B8],
ZI [auth B8],
ZL [auth AA],
ZM [auth AA],
ZN [auth AA],
ZO [auth AA],
ZP [auth AA],
ZQ [auth AD]
MAGNESIUM ION
Mg
JLVVSXFLKOJNIY-UHFFFAOYSA-N
Modified Residues  3 Unique
IDChains TypeFormula2D DiagramParent
AYA
Query on AYA
K [auth BB]L-PEPTIDE LINKINGC5 H9 N O3ALA
SAC
Query on SAC
AA [auth BR]L-PEPTIDE LINKINGC5 H9 N O4SER
THC
Query on THC
AB [auth Bs]L-PEPTIDE LINKINGC6 H11 N O4THR
Experimental Data & Validation

Experimental Data

  • Method: ELECTRON MICROSCOPY
  • Resolution: 3.60 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 
EM Software:
TaskSoftware PackageVersion
RECONSTRUCTIONcryoSPARC4
MODEL REFINEMENTPHENIX1.20.1

Structure Validation

View Full Validation Report



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
Swiss National Science FoundationSwitzerland179190
Swiss National Science FoundationSwitzerland182341
European Molecular Biology Organization (EMBO)European Union1074-2019

Revision History  (Full details and data files)

  • Version 1.0: 2023-06-14
    Type: Initial release
  • Version 2.0: 2023-11-15
    Changes: Atomic model, Data collection, Derived calculations, Refinement description
  • Version 2.1: 2024-04-24
    Changes: Data collection, Structure summary