Welcome
RCSB Protein Data Bank (RCSB PDB) enables breakthroughs in science and education by providing access and tools for exploration, visualization, and analysis of:
Experimentally-determined 3D structures from the Protein Data Bank (PDB) archive | |
Computed Structure Models (CSM) from AlphaFold DB and ModelArchive |
These data can be explored in context of external annotations providing a structural view of biology.
Latest Entries
8RD8
Cryo-EM structure of P. urativorans 70S ribosome in complex with hibernation factors Balon and RaiA (structure 1).
8CGX
structure of HEX-1 from N. crassa crystallized in cellulo, diffracted at 100K and resolved using XDS
8WDV
Photosynthetic LH1-RC complex from the purple sulfur bacterium Allochromatium vinosum purified by Ca2+-DEAE
Features & Highlights
Use a Python Package to Access the RCSB PDB Search API
Perform Advanced Search queries through a Pythonic interface
Notice: NGL Viewer Deprecation
As of June 28, 2024, the NGL molecular viewer will be removed from RCSB.org. Users are encouraged to use Mol* for 3D visualization.
Take the CSM User Survey and Win
Please take this brief survey about Computed Structure Models at RCSB.org to be entered into a drawing for a set of Bound Playing Cards.
Undergrads: Spend your summer with RCSB PDB
RISE at Rutgers is a nationally acclaimed summer research program for outstanding undergraduates from diverse backgrounds. Applications are now open.
Switch from MMTF to BCIF
As of July 2, 2024, RCSB PDB will no longer serve PDB data in the MMTF compression format. Users should switch to BCIF.
Resources for Supporting the Extended PDB ID Format (pdb_00001abc)
Users and related software will need to transition to the extended PDB ID format and PDBx/mmCIF file format by 2029
Applications Open for Director
Distinguished scientists focused on 3D structures of biological macromolecules are invited to apply for this position with the RCSB PDB at Rutgers University.
Time-stamped Copies of PDB and EMDB Archives
Snapshots of the PDB and EMDB Core archives as of January 2024 are available.
Improved Depositor Experience Using ORCiD
ORCiD summary table improvements include expanded details and a sorting function
PDB Entries with Novel Ligands Now Distributed Only in PDBx/mmCIF and PDBML File Formats
PDB has run out of 3-character CCD IDs. Entries with novel ligands will not be distributed in the legacy PDB file format
See new feature archive
wwPDB Preprint Published on NMR Restraint Validation
Read about wwPDB validation improvements on NMR restraint analysis with standardized NEF and NMR-STAR formats» 02/23/2024
wwPDB Preprint Published on CryoEM Archiving and Validation Recommendations
Read about new community recommendations developed at a workshop on cryoEM structure deposition and validation» 02/20/2024
PDB-101 Focus: Peak Performance
PDB-101 materials explore the structural biology of athletics and well-being» 02/16/2024
wwPDB Preprint Published on NextGen Archive
Read how the NextGen Archive provides centralized access to integrated annotations and enriched structural information» 02/14/2024
Meet RCSB PDB at The Biophysical Society Meeting
Visit poster B509 on Mon Feb 12 for exploring CSMs at RCSB.org and poster B533 on Wed Feb 14 for teaching and learning about symmetry» 02/06/2024
February 4 is World Cancer Day
PDB structures reveal how cell growth is normally controlled, and how cancer cells circumvent these essential controls» 02/01/2024
Register for VIZBI 2024 (March 13–15)
Learn the latest data visualization methods and techniques» 01/30/2024
Register for the February 13 Mol* Webinar
Join RCSB PDB to learn how to Visualize Biomolecular structures with Mol*: From Atoms to Movies» 01/19/2024
Register for the February 5 RCSB.org Office Hour
Have questions about how to use RCSB.org? Join us for a virtual Office Hour.» 01/16/2024
Molecule of the Month
Quarterly News (see archive)
Issue 100 - January 2024
In this issue: Spring Training Opportunities; 5-character CCD IDs; SACNAS/ABRCMS Report; and more.
In the Education Corner, learn about Bringing Proteins to Life: Exploring Protein Structures with Interactive Jmol Views.
Annual Reports
2022 Annual Report
Download the 2022 Annual Report (PDF) for an overview of recent RCSB PDB activities, including enabled access to ~1 million Computed Structure Models (CSMs) from AlphaFoldDB and RoseTTAFold.
