7MQA

Cryo-EM structure of the human SSU processome, state post-A1

  • Classification: RIBOSOME
  • Organism(s): Homo sapiens
  • Mutation(s): No 

  • Deposited: 2021-05-05 Released: 2021-09-22 
  • Deposition Author(s): Vanden Broeck, A., Singh, S., Klinge, S.
  • Funding Organization(s): National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS), European Molecular Biology Organization (EMBO)

Experimental Data Snapshot

  • Method: ELECTRON MICROSCOPY
  • Resolution: 2.70 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 

wwPDB Validation   3D Report Full Report


This is version 1.1 of the entry. See complete history. 


Literature

Nucleolar maturation of the human small subunit processome.

Singh, S., Vanden Broeck, A., Miller, L., Chaker-Margot, M., Klinge, S.

(2021) Science 373: eabj5338-eabj5338

  • DOI: 10.1126/science.abj5338
  • Primary Citation of Related Structures:  
    7MQ8, 7MQ9, 7MQA, 7MQJ

  • PubMed Abstract: 

    • [Figure: see text].

    Organizational Affiliation: 

    Laboratory of Protein and Nucleic Acid Chemistry, The Rockefeller University, New York, NY 10065, USA.



Macromolecules

Find similar proteins by: 
(by identity cutoff)  |  3D Structure
Entity ID: 4
MoleculeChainsSequence LengthOrganismDetailsImage
40S ribosomal protein S18D [auth L3]116Homo sapiensMutation(s): 0 
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
Protein Feature View
Expand
  • Reference Sequence
Find similar proteins by: 
(by identity cutoff)  |  3D Structure
Entity ID: 5
MoleculeChainsSequence LengthOrganismDetailsImage
40S ribosomal protein S4, X isoformE [auth L4]263Homo sapiensMutation(s): 0 
Gene Names: RPS4X, CCG2, RPS4, SCAR
UniProt & NIH Common Fund Data Resources
Find proteins for P62701 (Homo sapiens)
Explore P62701 
Go to UniProtKB:  P62701
PHAROS:  P62701
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP62701
Protein Feature View
Expand
  • Reference Sequence
Find similar proteins by: 
(by identity cutoff)  |  3D Structure
Entity ID: 6
MoleculeChainsSequence LengthOrganismDetailsImage
40S ribosomal protein S5F [auth L5]204Homo sapiensMutation(s): 0 
Gene Names: RPS5
UniProt & NIH Common Fund Data Resources
Find proteins for P46782 (Homo sapiens)
Explore P46782 
Go to UniProtKB:  P46782
PHAROS:  P46782
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP46782
Protein Feature View
Expand
  • Reference Sequence
Find similar proteins by: 
(by identity cutoff)  |  3D Structure
Entity ID: 7
MoleculeChainsSequence LengthOrganismDetailsImage
40S ribosomal protein S6G [auth L6]249Homo sapiensMutation(s): 0 
Gene Names: RPS6, OK/SW-cl.2
UniProt & NIH Common Fund Data Resources
Find proteins for P62753 (Homo sapiens)
Explore P62753 
Go to UniProtKB:  P62753
PHAROS:  P62753
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP62753
Protein Feature View
Expand
  • Reference Sequence
Find similar proteins by: 
(by identity cutoff)  |  3D Structure
Entity ID: 8
MoleculeChainsSequence LengthOrganismDetailsImage
40S ribosomal protein S7H [auth L7]194Homo sapiensMutation(s): 0 
Gene Names: RPS7
UniProt & NIH Common Fund Data Resources
Find proteins for P62081 (Homo sapiens)
Explore P62081 
Go to UniProtKB:  P62081
PHAROS:  P62081
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP62081
Protein Feature View
Expand
  • Reference Sequence
Find similar proteins by: 
(by identity cutoff)  |  3D Structure
Entity ID: 9
MoleculeChainsSequence LengthOrganismDetailsImage
40S ribosomal protein S8I [auth L8]208Homo sapiensMutation(s): 0 
Gene Names: RPS8, OK/SW-cl.83
UniProt & NIH Common Fund Data Resources
Find proteins for P62241 (Homo sapiens)
Explore P62241 
Go to UniProtKB:  P62241
PHAROS:  P62241
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP62241
Protein Feature View
Expand
  • Reference Sequence
Find similar proteins by: 
(by identity cutoff)  |  3D Structure
Entity ID: 10
MoleculeChainsSequence LengthOrganismDetailsImage
40S ribosomal protein S9J [auth L9]194Homo sapiensMutation(s): 0 
Gene Names: RPS9
UniProt & NIH Common Fund Data Resources
Find proteins for P46781 (Homo sapiens)
Explore P46781 
Go to UniProtKB:  P46781
PHAROS:  P46781
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP46781
Protein Feature View
Expand
  • Reference Sequence
Find similar proteins by: 
(by identity cutoff)  |  3D Structure
Entity ID: 11
MoleculeChainsSequence LengthOrganismDetailsImage
40S ribosomal protein S12K [auth LA]132Homo sapiensMutation(s): 0 
Gene Names: RPS12
UniProt & NIH Common Fund Data Resources
Find proteins for P25398 (Homo sapiens)
Explore P25398 
Go to UniProtKB:  P25398
PHAROS:  P25398
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP25398
Protein Feature View
Expand
  • Reference Sequence
Find similar proteins by: 
(by identity cutoff)  |  3D Structure
Entity ID: 12
MoleculeChainsSequence LengthOrganismDetailsImage
40S ribosomal protein S16L [auth LC]146Homo sapiensMutation(s): 0 
Gene Names: RPS16
UniProt & NIH Common Fund Data Resources
Find proteins for P62249 (Homo sapiens)
Explore P62249 
Go to UniProtKB:  P62249
PHAROS:  P62249
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP62249
Protein Feature View
Expand
  • Reference Sequence
Find similar proteins by: 
(by identity cutoff)  |  3D Structure
Entity ID: 13
MoleculeChainsSequence LengthOrganismDetailsImage
40S ribosomal protein S11M [auth LD]158Homo sapiensMutation(s): 0 
Gene Names: RPS11
UniProt & NIH Common Fund Data Resources
Find proteins for P62280 (Homo sapiens)
Explore P62280 
Go to UniProtKB:  P62280
PHAROS:  P62280
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP62280
Protein Feature View
Expand
  • Reference Sequence
Find similar proteins by: 
(by identity cutoff)  |  3D Structure
Entity ID: 14
MoleculeChainsSequence LengthOrganismDetailsImage
40S ribosomal protein S24N [auth LF]133Homo sapiensMutation(s): 0 
Gene Names: RPS24
UniProt & NIH Common Fund Data Resources
Find proteins for P62847 (Homo sapiens)
Explore P62847 
Go to UniProtKB:  P62847
PHAROS:  P62847
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP62847
Protein Feature View
Expand
  • Reference Sequence
Find similar proteins by: 
(by identity cutoff)  |  3D Structure
Entity ID: 15
MoleculeChainsSequence LengthOrganismDetailsImage
40S ribosomal protein S28O [auth LG]69Homo sapiensMutation(s): 0 
Gene Names: RPS28
UniProt & NIH Common Fund Data Resources
Find proteins for P62857 (Homo sapiens)
Explore P62857 
Go to UniProtKB:  P62857
PHAROS:  P62857
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP62857
Protein Feature View
Expand
  • Reference Sequence
Find similar proteins by: 
(by identity cutoff)  |  3D Structure
Entity ID: 16
MoleculeChainsSequence LengthOrganismDetailsImage
WD repeat-containing protein 75P [auth LH]830Homo sapiensMutation(s): 0 
Gene Names: WDR75, UTP17
UniProt & NIH Common Fund Data Resources
Find proteins for Q8IWA0 (Homo sapiens)
Explore Q8IWA0 
Go to UniProtKB:  Q8IWA0
PHAROS:  Q8IWA0
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ8IWA0
Protein Feature View
Expand
  • Reference Sequence
Find similar proteins by: 
(by identity cutoff)  |  3D Structure
Entity ID: 17
MoleculeChainsSequence LengthOrganismDetailsImage
Nucleolar protein 11Q [auth LI]678Homo sapiensMutation(s): 0 
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
Protein Feature View
Expand
  • Reference Sequence
Find similar proteins by: 
(by identity cutoff)  |  3D Structure
Entity ID: 18
MoleculeChainsSequence LengthOrganismDetailsImage
U3 small nucleolar RNA-associated protein 15 homologR [auth LJ]518Homo sapiensMutation(s): 0 
Gene Names: UTP15
UniProt & NIH Common Fund Data Resources
Find proteins for Q8TED0 (Homo sapiens)
Explore Q8TED0 
Go to UniProtKB:  Q8TED0
PHAROS:  Q8TED0
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ8TED0
Protein Feature View
Expand
  • Reference Sequence
Find similar proteins by: 
(by identity cutoff)  |  3D Structure
Entity ID: 19
MoleculeChainsSequence LengthOrganismDetailsImage
WD repeat-containing protein 43S [auth LK],
T [auth LL]		677Homo sapiensMutation(s): 0 
Gene Names: WDR43, KIAA0007, UTP5
UniProt & NIH Common Fund Data Resources
Find proteins for Q15061 (Homo sapiens)
Explore Q15061 
Go to UniProtKB:  Q15061
PHAROS:  Q15061
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ15061
Protein Feature View
Expand
  • Reference Sequence
Find similar proteins by: 
(by identity cutoff)  |  3D Structure
Entity ID: 20
MoleculeChainsSequence LengthOrganismDetailsImage
HEAT repeat-containing protein 1U [auth LM]2144Homo sapiensMutation(s): 0 
Gene Names: HEATR1, BAP28, UTP10
UniProt & NIH Common Fund Data Resources
Find proteins for Q9H583 (Homo sapiens)
Explore Q9H583 
Go to UniProtKB:  Q9H583
PHAROS:  Q9H583
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ9H583
Protein Feature View
Expand
  • Reference Sequence
Find similar proteins by: 
(by identity cutoff)  |  3D Structure
Entity ID: 21
MoleculeChainsSequence LengthOrganismDetailsImage
U3 small nucleolar RNA-associated protein 4 homologV [auth LN]686Homo sapiensMutation(s): 0 
Gene Names: UTP4, CIRH1A, cPERP-E, KIAA1988
UniProt & NIH Common Fund Data Resources
Find proteins for Q969X6 (Homo sapiens)
Explore Q969X6 
Go to UniProtKB:  Q969X6
PHAROS:  Q969X6
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ969X6
Protein Feature View
Expand
  • Reference Sequence
Find similar proteins by: 
(by identity cutoff)  |  3D Structure
Entity ID: 22
MoleculeChainsSequence LengthOrganismDetailsImage
Periodic tryptophan protein 2 homologW [auth LO]919Homo sapiensMutation(s): 0 
Gene Names: PWP2, PWP2H
UniProt & NIH Common Fund Data Resources
Find proteins for Q15269 (Homo sapiens)
Explore Q15269 
Go to UniProtKB:  Q15269
PHAROS:  Q15269
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ15269
Protein Feature View
Expand
  • Reference Sequence
Find similar proteins by: 
(by identity cutoff)  |  3D Structure
Entity ID: 23
MoleculeChainsSequence LengthOrganismDetailsImage
U3 small nucleolar RNA-associated protein 6 homologX [auth LP]597Homo sapiensMutation(s): 0 
Gene Names: UTP6, C17orf40, HCA66, MHAT
UniProt & NIH Common Fund Data Resources
Find proteins for Q9NYH9 (Homo sapiens)
Explore Q9NYH9 
Go to UniProtKB:  Q9NYH9
PHAROS:  Q9NYH9
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ9NYH9
Protein Feature View
Expand
  • Reference Sequence
Find similar proteins by: 
(by identity cutoff)  |  3D Structure
Entity ID: 24
MoleculeChainsSequence LengthOrganismDetailsImage
WD repeat-containing protein 3Y [auth LQ]943Homo sapiensMutation(s): 0 
Gene Names: WDR3
UniProt & NIH Common Fund Data Resources
Find proteins for Q9UNX4 (Homo sapiens)
Explore Q9UNX4 
Go to UniProtKB:  Q9UNX4
PHAROS:  Q9UNX4
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ9UNX4
Protein Feature View
Expand
  • Reference Sequence
Find similar proteins by: 
(by identity cutoff)  |  3D Structure
Entity ID: 25
MoleculeChainsSequence LengthOrganismDetailsImage
Transducin beta-like protein 3Z [auth LR]808Homo sapiensMutation(s): 0 
Gene Names: TBL3, SAZD
UniProt & NIH Common Fund Data Resources
Find proteins for Q12788 (Homo sapiens)
Explore Q12788 
Go to UniProtKB:  Q12788
PHAROS:  Q12788
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ12788
Protein Feature View
Expand
  • Reference Sequence
Find similar proteins by: 
(by identity cutoff)  |  3D Structure
Entity ID: 26
MoleculeChainsSequence LengthOrganismDetailsImage
U3 small nucleolar RNA-associated protein 18 homologAA [auth LS]556Homo sapiensMutation(s): 0 
Gene Names: UTP18, WDR50, CDABP0061, CGI-48
UniProt & NIH Common Fund Data Resources
Find proteins for Q9Y5J1 (Homo sapiens)
Explore Q9Y5J1 
Go to UniProtKB:  Q9Y5J1
PHAROS:  Q9Y5J1
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ9Y5J1
Protein Feature View
Expand
  • Reference Sequence
Find similar proteins by: 
(by identity cutoff)  |  3D Structure
Entity ID: 27
MoleculeChainsSequence LengthOrganismDetailsImage
WD repeat-containing protein 36BA [auth LT]951Homo sapiensMutation(s): 0 
Gene Names: WDR36
UniProt & NIH Common Fund Data Resources
Find proteins for Q8NI36 (Homo sapiens)
Explore Q8NI36 
Go to UniProtKB:  Q8NI36
PHAROS:  Q8NI36
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ8NI36
Protein Feature View
Expand
  • Reference Sequence
Find similar proteins by: 
(by identity cutoff)  |  3D Structure
Entity ID: 28
MoleculeChainsSequence LengthOrganismDetailsImage
DDB1- and CUL4-associated factor 13CA [auth LU]445Homo sapiensMutation(s): 0 
Gene Names: DCAF13, WDSOF1, HSPC064
UniProt & NIH Common Fund Data Resources
Find proteins for Q9NV06 (Homo sapiens)
Explore Q9NV06 
Go to UniProtKB:  Q9NV06
PHAROS:  Q9NV06
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ9NV06
Protein Feature View
Expand
  • Reference Sequence
Find similar proteins by: 
(by identity cutoff)  |  3D Structure
Entity ID: 29
MoleculeChainsSequence LengthOrganismDetailsImage
WD repeat-containing protein 46DA [auth LW]610Homo sapiensMutation(s): 0 
Gene Names: WDR46, BING4, C6orf11, FP221
UniProt & NIH Common Fund Data Resources
Find proteins for O15213 (Homo sapiens)
Explore O15213 
Go to UniProtKB:  O15213
PHAROS:  O15213
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupO15213
Protein Feature View
Expand
  • Reference Sequence
Find similar proteins by: 
(by identity cutoff)  |  3D Structure
Entity ID: 30
MoleculeChainsSequence LengthOrganismDetailsImage
Active regulator of SIRT1EA [auth LY]136Homo sapiensMutation(s): 0 
Gene Names: RPS19BP1, AROS
UniProt & NIH Common Fund Data Resources
Find proteins for Q86WX3 (Homo sapiens)
Explore Q86WX3 
Go to UniProtKB:  Q86WX3
PHAROS:  Q86WX3
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ86WX3
Protein Feature View
Expand
  • Reference Sequence
Find similar proteins by: 
(by identity cutoff)  |  3D Structure
Entity ID: 31
MoleculeChainsSequence LengthOrganismDetailsImage
U3 small nucleolar ribonucleoprotein protein IMP3FA [auth LZ]184Homo sapiensMutation(s): 0 
Gene Names: IMP3, C15orf12, MRPS4
UniProt & NIH Common Fund Data Resources
Find proteins for Q9NV31 (Homo sapiens)
Explore Q9NV31 
Go to UniProtKB:  Q9NV31
PHAROS:  Q9NV31
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ9NV31
Protein Feature View
Expand
  • Reference Sequence
Find similar proteins by: 
(by identity cutoff)  |  3D Structure
Entity ID: 32
MoleculeChainsSequence LengthOrganismDetailsImage
U3 small nucleolar ribonucleoprotein protein MPP10GA [auth NA]681Homo sapiensMutation(s): 0 
Gene Names: MPHOSPH10, MPP10
UniProt & NIH Common Fund Data Resources
Find proteins for O00566 (Homo sapiens)
Explore O00566 
Go to UniProtKB:  O00566
PHAROS:  O00566
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupO00566
Protein Feature View
Expand
  • Reference Sequence
Find similar proteins by: 
(by identity cutoff)  |  3D Structure
Entity ID: 33
MoleculeChainsSequence LengthOrganismDetailsImage
Something about silencing protein 10HA [auth NB]479Homo sapiensMutation(s): 0 
Gene Names: UTP3, CRLZ1, SAS10
UniProt & NIH Common Fund Data Resources
Find proteins for Q9NQZ2 (Homo sapiens)
Explore Q9NQZ2 
Go to UniProtKB:  Q9NQZ2
PHAROS:  Q9NQZ2
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ9NQZ2
Protein Feature View
Expand
  • Reference Sequence
Find similar proteins by: 
(by identity cutoff)  |  3D Structure
Entity ID: 34
MoleculeChainsSequence LengthOrganismDetailsImage
Nucleolar protein 7IA [auth ND]257Homo sapiensMutation(s): 0 
Gene Names: NOL7, C6orf90, NOP27
UniProt & NIH Common Fund Data Resources
Find proteins for Q9UMY1 (Homo sapiens)
Explore Q9UMY1 
Go to UniProtKB:  Q9UMY1
PHAROS:  Q9UMY1
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ9UMY1
Protein Feature View
Expand
  • Reference Sequence
Find similar proteins by: 
(by identity cutoff)  |  3D Structure
Entity ID: 35
MoleculeChainsSequence LengthOrganismDetailsImage
40S ribosomal protein S13JA [auth NF]151Homo sapiensMutation(s): 0 
Gene Names: RPS13
UniProt & NIH Common Fund Data Resources
Find proteins for P62277 (Homo sapiens)
Explore P62277 
Go to UniProtKB:  P62277
PHAROS:  P62277
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP62277
Protein Feature View
Expand
  • Reference Sequence
Find similar proteins by: 
(by identity cutoff)  |  3D Structure
Entity ID: 36
MoleculeChainsSequence LengthOrganismDetailsImage
40S ribosomal protein S14KA [auth NG]151Homo sapiensMutation(s): 0 
Gene Names: RPS14, PRO2640
UniProt & NIH Common Fund Data Resources
Find proteins for P62263 (Homo sapiens)
Explore P62263 
Go to UniProtKB:  P62263
PHAROS:  P62263
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP62263
Protein Feature View
Expand
  • Reference Sequence
Find similar proteins by: 
(by identity cutoff)  |  3D Structure
Entity ID: 37
MoleculeChainsSequence LengthOrganismDetailsImage
Nucleolar protein 6LA [auth NH]1146Homo sapiensMutation(s): 0 
Gene Names: NOL6
UniProt & NIH Common Fund Data Resources
Find proteins for Q9H6R4 (Homo sapiens)
Explore Q9H6R4 
Go to UniProtKB:  Q9H6R4
PHAROS:  Q9H6R4
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ9H6R4
Protein Feature View
Expand
  • Reference Sequence
Find similar proteins by: 
(by identity cutoff)  |  3D Structure
Entity ID: 38
MoleculeChainsSequence LengthOrganismDetailsImage
Ribosomal RNA-processing protein 7 homolog AMA [auth NI]280Homo sapiensMutation(s): 0 
Gene Names: RRP7A, CGI-96
UniProt & NIH Common Fund Data Resources
Find proteins for Q9Y3A4 (Homo sapiens)
Explore Q9Y3A4 
Go to UniProtKB:  Q9Y3A4
PHAROS:  Q9Y3A4
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ9Y3A4
Protein Feature View
Expand
  • Reference Sequence
Find similar proteins by: 
(by identity cutoff)  |  3D Structure
Entity ID: 39
MoleculeChainsSequence LengthOrganismDetailsImage
Probable dimethyladenosine transferaseNA [auth NL]313Homo sapiensMutation(s): 0 
Gene Names: DIMT1, DIMT1L, HUSSY-05
EC: 2.1.1.183
UniProt & NIH Common Fund Data Resources
Find proteins for Q9UNQ2 (Homo sapiens)
Explore Q9UNQ2 
Go to UniProtKB:  Q9UNQ2
PHAROS:  Q9UNQ2
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ9UNQ2
Protein Feature View
Expand
  • Reference Sequence
Find similar proteins by: 
(by identity cutoff)  |  3D Structure
Entity ID: 40
MoleculeChainsSequence LengthOrganismDetailsImage
40S ribosomal protein S3aOA [auth NM]264Homo sapiensMutation(s): 0 
Gene Names: RPS3A, FTE1, MFTL
UniProt
Find proteins for P61247 (Homo sapiens)
Explore P61247 
Go to UniProtKB:  P61247
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP61247
Protein Feature View
Expand
  • Reference Sequence
Find similar proteins by: 
(by identity cutoff)  |  3D Structure
Entity ID: 41
MoleculeChainsSequence LengthOrganismDetailsImage
40S ribosomal protein S15aPA [auth NO]130Homo sapiensMutation(s): 0 
Gene Names: RPS15A, OK/SW-cl.82
UniProt & NIH Common Fund Data Resources
Find proteins for P62244 (Homo sapiens)
Explore P62244 
Go to UniProtKB:  P62244
PHAROS:  P62244
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP62244
Protein Feature View
Expand
  • Reference Sequence
Find similar proteins by: 
(by identity cutoff)  |  3D Structure
Entity ID: 42
MoleculeChainsSequence LengthOrganismDetailsImage
40S ribosomal protein S19QA [auth NP]145Homo sapiensMutation(s): 0 
Gene Names: RPS19
UniProt & NIH Common Fund Data Resources
Find proteins for P39019 (Homo sapiens)
Explore P39019 
Go to UniProtKB:  P39019
PHAROS:  P39019
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP39019
Protein Feature View
Expand
  • Reference Sequence
Find similar proteins by: 
(by identity cutoff)  |  3D Structure
Entity ID: 43
MoleculeChainsSequence LengthOrganismDetailsImage
40S ribosomal protein S27RA [auth NQ]84Homo sapiensMutation(s): 0 
Gene Names: RPS27, MPS1
UniProt & NIH Common Fund Data Resources
Find proteins for P42677 (Homo sapiens)
Explore P42677 
Go to UniProtKB:  P42677
PHAROS:  P42677
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP42677
Protein Feature View
Expand
  • Reference Sequence
Find similar proteins by: 
(by identity cutoff)  |  3D Structure
Entity ID: 44
MoleculeChainsSequence LengthOrganismDetailsImage
RRP12-like proteinSA [auth NR]861Homo sapiensMutation(s): 0 
Protein Feature View
Expand
  • Reference Sequence
Find similar proteins by: 
(by identity cutoff)  |  3D Structure
Entity ID: 45
MoleculeChainsSequence LengthOrganismDetailsImage
Probable ATP-dependent RNA helicase DHX37TA [auth NS]1157Homo sapiensMutation(s): 0 
Gene Names: DHX37, DDX37, KIAA1517
EC: 3.6.4.13
UniProt & NIH Common Fund Data Resources
Find proteins for Q8IY37 (Homo sapiens)
Explore Q8IY37 
Go to UniProtKB:  Q8IY37
PHAROS:  Q8IY37
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ8IY37
Protein Feature View
Expand
  • Reference Sequence
Find similar proteins by: 
(by identity cutoff)  |  3D Structure
Entity ID: 46
MoleculeChainsSequence LengthOrganismDetailsImage
Ubiquitin-40S ribosomal protein S27aUA [auth NT]156Homo sapiensMutation(s): 0 
Gene Names: RPS27A, UBA80, UBCEP1
UniProt & NIH Common Fund Data Resources
Find proteins for P62979 (Homo sapiens)
Explore P62979 
Go to UniProtKB:  P62979
PHAROS:  P62979
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP62979
Protein Feature View
Expand
  • Reference Sequence
Find similar proteins by: 
(by identity cutoff)  |  3D Structure
Entity ID: 47
MoleculeChainsSequence LengthOrganismDetailsImage
40S ribosomal protein S17VA [auth NU]135Homo sapiensMutation(s): 0 
Gene Names: RPS17, RPS17L
UniProt & NIH Common Fund Data Resources
Find proteins for P08708 (Homo sapiens)
Explore P08708 
Go to UniProtKB:  P08708
PHAROS:  P08708
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP08708
Protein Feature View
Expand
  • Reference Sequence
Find similar proteins by: 
(by identity cutoff)  |  3D Structure
Entity ID: 48
MoleculeChainsSequence LengthOrganismDetailsImage
Exosome component 10WA [auth NV]885Homo sapiensMutation(s): 0 
Gene Names: EXOSC10, PMSCL, PMSCL2, RRP6
EC: 3.1.13
UniProt & NIH Common Fund Data Resources
Find proteins for Q01780 (Homo sapiens)
Explore Q01780 
Go to UniProtKB:  Q01780
PHAROS:  Q01780
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ01780
Protein Feature View
Expand
  • Reference Sequence
Find similar proteins by: 
(by identity cutoff)  |  3D Structure
Entity ID: 49
MoleculeChainsSequence LengthOrganismDetailsImage
Nucleolar protein 56XA [auth SA]594Homo sapiensMutation(s): 0 
Gene Names: NOP56, NOL5A
UniProt & NIH Common Fund Data Resources
Find proteins for O00567 (Homo sapiens)
Explore O00567 
Go to UniProtKB:  O00567
PHAROS:  O00567
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupO00567
Protein Feature View
Expand
  • Reference Sequence
Find similar proteins by: 
(by identity cutoff)  |  3D Structure
Entity ID: 50
MoleculeChainsSequence LengthOrganismDetailsImage
Nucleolar protein 58YA [auth SB]529Homo sapiensMutation(s): 0 
Gene Names: NOP58, NOL5, NOP5, HSPC120
UniProt & NIH Common Fund Data Resources
Find proteins for Q9Y2X3 (Homo sapiens)
Explore Q9Y2X3 
Go to UniProtKB:  Q9Y2X3
PHAROS:  Q9Y2X3
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ9Y2X3
Protein Feature View
Expand
  • Reference Sequence
Find similar proteins by: 
(by identity cutoff)  |  3D Structure
Entity ID: 51
MoleculeChainsSequence LengthOrganismDetailsImage
rRNA 2'-O-methyltransferase fibrillarinZA [auth SC],
AB [auth SD]		321Homo sapiensMutation(s): 0 
Gene Names: FBL, FIB1, FLRN
EC: 2.1.1
UniProt & NIH Common Fund Data Resources
Find proteins for P22087 (Homo sapiens)
Explore P22087 
Go to UniProtKB:  P22087
PHAROS:  P22087
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP22087
Protein Feature View
Expand
  • Reference Sequence
Find similar proteins by: 
(by identity cutoff)  |  3D Structure
Entity ID: 52
MoleculeChainsSequence LengthOrganismDetailsImage
NHP2-like protein 1BB [auth SE],
CB [auth SF]		128Homo sapiensMutation(s): 0 
Gene Names: SNU13, NHP2L1
UniProt & NIH Common Fund Data Resources
Find proteins for P55769 (Homo sapiens)
Explore P55769 
Go to UniProtKB:  P55769
PHAROS:  P55769
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP55769
Protein Feature View
Expand
  • Reference Sequence
Find similar proteins by: 
(by identity cutoff)  |  3D Structure
Entity ID: 53
MoleculeChainsSequence LengthOrganismDetailsImage
U3 small nucleolar RNA-interacting protein 2DB [auth SG]475Homo sapiensMutation(s): 0 
Gene Names: RRP9, RNU3IP2, U355K
UniProt & NIH Common Fund Data Resources
Find proteins for O43818 (Homo sapiens)
Explore O43818 
Go to UniProtKB:  O43818
PHAROS:  O43818
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupO43818
Protein Feature View
Expand
  • Reference Sequence
Find similar proteins by: 
(by identity cutoff)  |  3D Structure
Entity ID: 54
MoleculeChainsSequence LengthOrganismDetailsImage
RNA 3'-terminal phosphate cyclase-like proteinEB [auth SH]373Homo sapiensMutation(s): 0 
Gene Names: RCL1, RNAC, RPC2, RPCL1, RTC2, HSPC338
UniProt & NIH Common Fund Data Resources
Find proteins for Q9Y2P8 (Homo sapiens)
Explore Q9Y2P8 
Go to UniProtKB:  Q9Y2P8
PHAROS:  Q9Y2P8
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ9Y2P8
Protein Feature View
Expand
  • Reference Sequence
Find similar proteins by: 
(by identity cutoff)  |  3D Structure
Entity ID: 55
MoleculeChainsSequence LengthOrganismDetailsImage
Ribosome biogenesis protein BMS1 homologFB [auth SI]1282Homo sapiensMutation(s): 0 
Gene Names: BMS1, BMS1L, KIAA0187
UniProt & NIH Common Fund Data Resources
Find proteins for Q14692 (Homo sapiens)
Explore Q14692 
Go to UniProtKB:  Q14692
PHAROS:  Q14692
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ14692
Protein Feature View
Expand
  • Reference Sequence
Find similar proteins by: 
(by identity cutoff)  |  3D Structure
Entity ID: 56
MoleculeChainsSequence LengthOrganismDetailsImage
Ribosomal RNA small subunit methyltransferase NEP1GB [auth SJ],
HB [auth SK]		244Homo sapiensMutation(s): 0 
Gene Names: EMG1, C2F
EC: 2.1.1
UniProt & NIH Common Fund Data Resources
Find proteins for Q92979 (Homo sapiens)
Explore Q92979 
Go to UniProtKB:  Q92979
PHAROS:  Q92979
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ92979
Protein Feature View
Expand
  • Reference Sequence
Find similar proteins by: 
(by identity cutoff)  |  3D Structure
Entity ID: 57
MoleculeChainsSequence LengthOrganismDetailsImage
rRNA-processing protein FCF1 homologIB [auth SL]198Homo sapiensMutation(s): 0 
Gene Names: FCF1, C14orf111, CGI-35
UniProt & NIH Common Fund Data Resources
Find proteins for Q9Y324 (Homo sapiens)
Explore Q9Y324 
Go to UniProtKB:  Q9Y324
PHAROS:  Q9Y324
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ9Y324
Protein Feature View
Expand
  • Reference Sequence
Find similar proteins by: 
(by identity cutoff)  |  3D Structure
Entity ID: 58
MoleculeChainsSequence LengthOrganismDetailsImage
U3 small nucleolar ribonucleoprotein protein IMP4JB [auth SM]291Homo sapiensMutation(s): 0 
Gene Names: IMP4, BXDC4
UniProt & NIH Common Fund Data Resources
Find proteins for Q96G21 (Homo sapiens)
Explore Q96G21 
Go to UniProtKB:  Q96G21
PHAROS:  Q96G21
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ96G21
Protein Feature View
Expand
  • Reference Sequence
Find similar proteins by: 
(by identity cutoff)  |  3D Structure
Entity ID: 59
MoleculeChainsSequence LengthOrganismDetailsImage
Small subunit processome component 20 homologKB [auth SP]2785Homo sapiensMutation(s): 0 
Gene Names: UTP20, DRIM
UniProt & NIH Common Fund Data Resources
Find proteins for O75691 (Homo sapiens)
Explore O75691 
Go to UniProtKB:  O75691
PHAROS:  O75691
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupO75691
Protein Feature View
Expand
  • Reference Sequence
Find similar proteins by: 
(by identity cutoff)  |  3D Structure
Entity ID: 60
MoleculeChainsSequence LengthOrganismDetailsImage
Deoxynucleotidyltransferase terminal-interacting protein 2LB [auth SQ]756Homo sapiensMutation(s): 0 
Gene Names: DNTTIP2, ERBP, TDIF2
UniProt & NIH Common Fund Data Resources
Find proteins for Q5QJE6 (Homo sapiens)
Explore Q5QJE6 
Go to UniProtKB:  Q5QJE6
PHAROS:  Q5QJE6
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ5QJE6
Protein Feature View
Expand
  • Reference Sequence
Find similar proteins by: 
(by identity cutoff)  |  3D Structure
Entity ID: 61
MoleculeChainsSequence LengthOrganismDetailsImage
40S ribosomal protein S23MB [auth SR]143Homo sapiensMutation(s): 0 
Gene Names: RPS23
UniProt & NIH Common Fund Data Resources
Find proteins for P62266 (Homo sapiens)
Explore P62266 
Go to UniProtKB:  P62266
PHAROS:  P62266
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP62266
Protein Feature View
Expand
  • Reference Sequence
Find similar proteins by: 
(by identity cutoff)  |  3D Structure
Entity ID: 62
MoleculeChainsSequence LengthOrganismDetailsImage
U3 small nucleolar RNA-associated protein 14 homolog ANB [auth SS]771Homo sapiensMutation(s): 0 
Gene Names: UTP14A, SDCCAG16
UniProt & NIH Common Fund Data Resources
Find proteins for Q9BVJ6 (Homo sapiens)
Explore Q9BVJ6 
Go to UniProtKB:  Q9BVJ6
PHAROS:  Q9BVJ6
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ9BVJ6
Protein Feature View
Expand
  • Reference Sequence
Find similar proteins by: 
(by identity cutoff)  |  3D Structure
Entity ID: 63
MoleculeChainsSequence LengthOrganismDetailsImage
Nucleolar protein 14OB [auth ST]632Homo sapiensMutation(s): 0 
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
Protein Feature View
Expand
  • Reference Sequence
Find similar proteins by: 
(by identity cutoff)  |  3D Structure
Entity ID: 64
MoleculeChainsSequence LengthOrganismDetailsImage
Nucleolar complex protein 4 homologPB [auth SU]472Homo sapiensMutation(s): 0 
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
Protein Feature View
Expand
  • Reference Sequence
Find similar proteins by: 
(by identity cutoff)  |  3D Structure
Entity ID: 65
MoleculeChainsSequence LengthOrganismDetailsImage
RNA-binding protein PNO1QB [auth SW]252Homo sapiensMutation(s): 0 
Gene Names: PNO1
UniProt & NIH Common Fund Data Resources
Find proteins for Q9NRX1 (Homo sapiens)
Explore Q9NRX1 
Go to UniProtKB:  Q9NRX1
PHAROS:  Q9NRX1
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ9NRX1
Protein Feature View
Expand
  • Reference Sequence
Find similar proteins by: 
(by identity cutoff)  |  3D Structure
Entity ID: 66
MoleculeChainsSequence LengthOrganismDetailsImage
Unassigned peptidesRB [auth SX]228Homo sapiensMutation(s): 0 
Protein Feature View
Expand
  • Reference Sequence
Find similar proteins by: 
(by identity cutoff)  |  3D Structure
Entity ID: 67
MoleculeChainsSequence LengthOrganismDetailsImage
Probable U3 small nucleolar RNA-associated protein 11SB [auth SY]253Homo sapiensMutation(s): 0 
Gene Names: UTP11, UTP11L, CGI-94, HDCMB12P
UniProt & NIH Common Fund Data Resources
Find proteins for Q9Y3A2 (Homo sapiens)
Explore Q9Y3A2 
Go to UniProtKB:  Q9Y3A2
PHAROS:  Q9Y3A2
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ9Y3A2
Protein Feature View
Expand
  • Reference Sequence
Find similar proteins by: 
(by identity cutoff)  |  3D Structure
Entity ID: 68
MoleculeChainsSequence LengthOrganismDetailsImage
BystinTB [auth SZ]304Homo sapiensMutation(s): 0 
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
Protein Feature View
Expand
  • Reference Sequence
Find similar nucleic acids by: