4EZ3

CDK2 in complex with NSC 134199


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.0 Å
  • R-Value Free: 0.251
  • R-Value Work: 0.215

Literature

Macromolecules
Sequence Display for 4EZ3

Classification: TRANSFERASE / TRANSFERASE INHIBITOR

Total Structure Weight: 35117.70

Macromolecule Entities
Molecule Chains Length Organism Details
Cyclin-dependent kinase 2 A 306 Homo sapiens EC#: 2.7.11.22 IUBMB
Gene Name(s): CDK2 Gene View CDKN2
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
0S0
Query on 0S0

A 4-[(E)-(6-hydroxy-2-oxo-1,2-dihydropyridin- 3-yl)diazenyl]benzenesulfonamide
C11 H10 N4 O4 S
NVVKOBSVOCFOEN-CCEZHUSRSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
EDO
Query on EDO

A 1,2-ETHANEDIOL
ETHYLENE GLYCOL (Synonym)
C2 H6 O2
LYCAIKOWRPUZTN-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
External Ligand Annotations
ID Binding Affinity (Sequence Identity %)
0S0 N/A in BindingDB
N/A in BindingMoad
IC50: 45000 nM  PDBbind

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.0 Å
  • R-Value Free: 0.251
  • R-Value Work: 0.215
  • Space Group: P 21 21 21

Unit Cell:

Length (Å) Angle (°)
a = 53.42 α = 90.00
b = 70.39 β = 90.00
c = 71.46 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2012-05-02
  • Released Date: 2012-08-22
  • Deposition author(s): Alam, R., Martin, M., Zhu, J.-Y., Schonbrunn, E.

Revision History

  • Version 1_0: 2012-08-22

    Type: Initial release

  • Version 1_1: 2012-10-03

    Type: Database references