Crystal structure of ZsYellow soaked by Cu2+
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| D [auth B] | GFP | e6lofB1 | A: beta barrels | X: GFP-like (From Topology) | H: GFP-like (From Topology) | T: GFP-like | F: GFP | ECOD (1.6) |
| B [auth A] | GFP | e6lofA1 | A: beta barrels | X: GFP-like (From Topology) | H: GFP-like (From Topology) | T: GFP-like | F: GFP | ECOD (1.6) |
| C [auth D] | GFP | e6lofD1 | A: beta barrels | X: GFP-like (From Topology) | H: GFP-like (From Topology) | T: GFP-like | F: GFP | ECOD (1.6) |
| A [auth C] | GFP | e6lofC1 | A: beta barrels | X: GFP-like (From Topology) | H: GFP-like (From Topology) | T: GFP-like | F: GFP | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| D [auth B] | 2.40.155.10 | Mainly Beta | Beta Barrel | Green Fluorescent Protein | Green fluorescent protein | CATH (utative) |
| B [auth A] | 2.40.155.10 | Mainly Beta | Beta Barrel | Green Fluorescent Protein | Green fluorescent protein | CATH (utative) |
| C [auth D] | 3.30.1300.40 | Alpha Beta | 2-Layer Sandwich | Pantoate--beta-alanine Ligase | Chain: A,domain 2 | CATH (utative) |
| A [auth C] | 3.30.1300.40 | Alpha Beta | 2-Layer Sandwich | Pantoate--beta-alanine Ligase | Chain: A,domain 2 | CATH (utative) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| B [auth A], D [auth B] | PF01353 | Green fluorescent protein (GFP) | Green fluorescent protein | Domain | |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| B [auth A], D [auth B] | GFP-like fluorescent chromoprotein FP538 | - | - | |
| A [auth C], C [auth D] | GFP-like fluorescent chromoprotein FP538 | - | - |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| B [auth A], D [auth B] | IPR011584 | Green fluorescent protein-related | Family |
| B [auth A], D [auth B] | IPR009017 | Green fluorescent protein | Homologous Superfamily |
| A [auth C], C [auth D] | IPR011584 | Green fluorescent protein-related | Family |
| A [auth C], C [auth D] | IPR009017 | Green fluorescent protein | Homologous Superfamily |
Protein Modification Annotation
| Modified Residue(s) | ||
|---|---|---|
| Chain | Residue(s) | Description |
| B [auth A], D [auth B] | CH7 | Parent Component: LYS, TYR, GLY : AA0382 : 2-tetrahydropyridinyl-5-imidazolinone glycine MOD:00387 |
| A [auth C], C [auth D] | NFA | Parent Component: PHE : AA0382 , AA0094 : 2-tetrahydropyridinyl-5-imidazolinone glycine MOD:00387 , L-phenylalanine amide MOD:00103 |
