9F62 | pdb_00009f62

Subtomogram average of the Chlamydomonas reinhardtii mitochondrial respirasome I2 III4 IV6


Experimental Data Snapshot

  • Method: ELECTRON MICROSCOPY
  • Resolution: 5.44 Å
  • Aggregation State: CELL 
  • Reconstruction Method: SUBTOMOGRAM AVERAGING 

wwPDB Validation   3D Report Full Report


This is version 1.1 of the entry. See complete history


Literature

In-cell architecture of the mitochondrial respiratory chain.

Waltz, F.Righetto, R.D.Lamm, L.Salinas-Giege, T.Kelley, R.Zhang, X.Obr, M.Khavnekar, S.Kotecha, A.Engel, B.D.

(2025) Science 387: 1296-1301

  • DOI: https://doi.org/10.1126/science.ads8738
  • Primary Citation of Related Structures:  
    9F5X, 9F5Y, 9F5Z, 9F60, 9F61, 9F62

  • PubMed Abstract: 

    Mitochondria regenerate adenosine triphosphate (ATP) through oxidative phosphorylation. This process is carried out by five membrane-bound complexes collectively known as the respiratory chain, working in concert to transfer electrons and pump protons. The precise organization of these complexes in native cells is debated. We used in situ cryo-electron tomography to visualize the native structures and organization of several major mitochondrial complexes in Chlamydomonas reinhardtii cells. ATP synthases and respiratory complexes segregate into curved and flat crista membrane domains, respectively. Respiratory complexes I, III, and IV assemble into a respirasome supercomplex, from which we determined a native 5-angstrom (Å) resolution structure showing binding of electron carrier cytochrome c . Combined with single-particle cryo-electron microscopy at 2.4-Å resolution, we model how the respiratory complexes organize inside native mitochondria.


  • Organizational Affiliation
    • Biozentrum, University of Basel, Basel, Switzerland.

Macromolecules
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Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
Cytochrome bA [auth 1A],
B [auth 1B],
DD [auth 6A],
ED [auth 6B]
381Chlamydomonas reinhardtiiMutation(s): 0 
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Entity ID: 2
MoleculeChains Sequence LengthOrganismDetailsImage
Cytochrome b-c1 complex subunit Rieske, mitochondrialC [auth 1C],
D [auth 1D],
FD [auth 6C],
GD [auth 6D]
262Chlamydomonas reinhardtiiMutation(s): 0 
EC: 7.1.1.8
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Entity ID: 3
MoleculeChains Sequence LengthOrganismDetailsImage
Cytochrome c1E [auth 1E],
F [auth 1F],
HD [auth 6E],
ID [auth 6F]
314Chlamydomonas reinhardtiiMutation(s): 0 
EC: 1.10.2.2
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Entity ID: 4
MoleculeChains Sequence LengthOrganismDetailsImage
Complex III subunit 9G [auth 1G],
H [auth 1H],
JD [auth 6G],
KD [auth 6H]
60Chlamydomonas reinhardtiiMutation(s): 0 
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Entity ID: 5
MoleculeChains Sequence LengthOrganismDetailsImage
Cytochrome b-c1 complex subunit 6I [auth 1I],
J [auth 1J],
LD [auth 6I],
MD [auth 6J]
69Chlamydomonas reinhardtiiMutation(s): 0 
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Entity ID: 6
MoleculeChains Sequence LengthOrganismDetailsImage
Mitochondrial ubiquinol-cytochrome c oxidoreductase subunit 8K [auth 1K],
L [auth 1L],
ND [auth 6K],
OD [auth 6L]
73Chlamydomonas reinhardtiiMutation(s): 0 
EC: 1.10.2.2
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Entity ID: 7
MoleculeChains Sequence LengthOrganismDetailsImage
MPP-BetaM [auth 1M],
N [auth 1N],
PD [auth 6M],
QD [auth 6N]
495Chlamydomonas reinhardtiiMutation(s): 0 
EC: 3.4.24.64
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Entity ID: 8
MoleculeChains Sequence LengthOrganismDetailsImage
Mitochondrial ubiquinol-cytochrome c oxidoreductase subunit 10O [auth 1O],
P [auth 1P],
RD [auth 6O],
SD [auth 6P]
59Chlamydomonas reinhardtiiMutation(s): 0 
EC: 1.10.2.2
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Entity ID: 9
MoleculeChains Sequence LengthOrganismDetailsImage
Alpha-MPPQ [auth 1Q],
S [auth 1S],
TD [auth 6Q],
VD [auth 6S]
485Chlamydomonas reinhardtiiMutation(s): 0 
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Entity ID: 10
MoleculeChains Sequence LengthOrganismDetailsImage
Cytochrome b-c1 complex subunit 7R [auth 1R],
T [auth 1T],
UD [auth 6R],
WD [auth 6T]
123Chlamydomonas reinhardtiiMutation(s): 0 
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Entity ID: 11
MoleculeChains Sequence LengthOrganismDetailsImage
Cytochrome c oxidase subunit 1505Chlamydomonas reinhardtiiMutation(s): 0 
EC: 7.1.1.9
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Entity ID: 12
MoleculeChains Sequence LengthOrganismDetailsImage
Cytochrome c oxidase polypeptide II284Chlamydomonas reinhardtiiMutation(s): 0 
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Entity ID: 13
MoleculeChains Sequence LengthOrganismDetailsImage
cytochrome-c oxidase153Chlamydomonas reinhardtiiMutation(s): 0 
EC: 7.1.1.9
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Entity ID: 14
MoleculeChains Sequence LengthOrganismDetailsImage
Cytochrome c oxidase subunit 3382Chlamydomonas reinhardtiiMutation(s): 0 
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Entity ID: 15
MoleculeChains Sequence LengthOrganismDetailsImage
Cox5b175Chlamydomonas reinhardtiiMutation(s): 0 
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Entity ID: 16
MoleculeChains Sequence LengthOrganismDetailsImage
Cox5c96Chlamydomonas reinhardtiiMutation(s): 0 
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Entity ID: 17
MoleculeChains Sequence LengthOrganismDetailsImage
Cox6a125Chlamydomonas reinhardtiiMutation(s): 0 
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Entity ID: 18
MoleculeChains Sequence LengthOrganismDetailsImage
Cox6b148Chlamydomonas reinhardtiiMutation(s): 0 
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Entity ID: 19
MoleculeChains Sequence LengthOrganismDetailsImage
Cox7c101Chlamydomonas reinhardtiiMutation(s): 0 
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Entity ID: 20
MoleculeChains Sequence LengthOrganismDetailsImage
Cytochrome c oxidase subunit105Chlamydomonas reinhardtiiMutation(s): 0 
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Entity ID: 21
MoleculeChains Sequence LengthOrganismDetailsImage
Cox7a58Chlamydomonas reinhardtiiMutation(s): 0 
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Entity ID: 22
MoleculeChains Sequence LengthOrganismDetailsImage
CoxIn87Chlamydomonas reinhardtiiMutation(s): 0 
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Entity ID: 23
MoleculeChains Sequence LengthOrganismDetailsImage
NADH:ubiquinone oxidoreductase 24 kD subunitEB [auth 5A],
HF [auth A]
282Chlamydomonas reinhardtiiMutation(s): 0 
EC: 1.6.5.3
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Entity ID: 24
MoleculeChains Sequence LengthOrganismDetailsImage
NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrialFB [auth 5B],
IF [auth B]
484Chlamydomonas reinhardtiiMutation(s): 0 
EC: 7.1.1.2
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Entity ID: 25
MoleculeChains Sequence LengthOrganismDetailsImage
NADH:ubiquinone oxidoreductase 78 kDa subunitGB [auth 5C],
JF [auth C]
733Chlamydomonas reinhardtiiMutation(s): 0 
EC: 1.6.5.3 (PDB Primary Data), 1.6.99.3 (PDB Primary Data)
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Entity ID: 26
MoleculeChains Sequence LengthOrganismDetailsImage
NADH:ubiquinone oxidoreductase 30kDa subunit domain-containing proteinHB [auth 5D],
KF [auth D]
282Chlamydomonas reinhardtiiMutation(s): 0 
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Entity ID: 27
MoleculeChains Sequence LengthOrganismDetailsImage
NADH:ubiquinone oxidoreductase 49 kD subunitIB [auth 5E],
LF [auth E]
467Chlamydomonas reinhardtiiMutation(s): 0 
EC: 1.6.5.3
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Entity ID: 28
MoleculeChains Sequence LengthOrganismDetailsImage
NADH:ubiquinone oxidoreductase subunit 10JB [auth 5F],
MF [auth F]
164Chlamydomonas reinhardtiiMutation(s): 0 
EC: 1.6.5.3
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Entity ID: 29
MoleculeChains Sequence LengthOrganismDetailsImage
NADH:ubiquinone oxidoreductase subunit 8KB [auth 5G],
NF [auth G]
231Chlamydomonas reinhardtiiMutation(s): 0 
EC: 1.6.5.3
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Entity ID: 30
MoleculeChains Sequence LengthOrganismDetailsImage
B14.5aLB [auth 5H],
OF [auth H]
118Chlamydomonas reinhardtiiMutation(s): 0 
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Entity ID: 31
MoleculeChains Sequence LengthOrganismDetailsImage
Mitochondrial NADH:ubiquinone oxidoreductase 18 kDa subunitMB [auth 5I],
PF [auth I]
165Chlamydomonas reinhardtiiMutation(s): 0 
EC: 1.6.5.3
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Entity ID: 32
MoleculeChains Sequence LengthOrganismDetailsImage
Acyl carrier proteinNB [auth 5J],
QF [auth J],
VC [auth 5r],
YG [auth r]
128Chlamydomonas reinhardtiiMutation(s): 0 
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Entity ID: 33
MoleculeChains Sequence LengthOrganismDetailsImage
NADH:ubiquinone oxidoreductase B14 subunitOB [auth 5K],
RF [auth K]
138Chlamydomonas reinhardtiiMutation(s): 0 
EC: 1.6.5.3 (PDB Primary Data), 1.6.99.3 (PDB Primary Data)
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Entity ID: 34
MoleculeChains Sequence LengthOrganismDetailsImage
NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrialPB [auth 5L],
SF [auth L]
187Chlamydomonas reinhardtiiMutation(s): 0 
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Entity ID: 35
MoleculeChains Sequence LengthOrganismDetailsImage
NADH:ubiquinone oxidoreductase 13 kD-like subunitQB [auth 5M],
TF [auth M]
154Chlamydomonas reinhardtiiMutation(s): 0 
EC: 1.6.5.3 (PDB Primary Data), 1.6.99.3 (PDB Primary Data)
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Entity ID: 36
MoleculeChains Sequence LengthOrganismDetailsImage
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12RB [auth 5N],
UF [auth N]
156Chlamydomonas reinhardtiiMutation(s): 0 
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Entity ID: 37
MoleculeChains Sequence LengthOrganismDetailsImage
NADH:ubiquinone oxidoreductase B8 subunitSB [auth 5O],
VF [auth O]
101Chlamydomonas reinhardtiiMutation(s): 0 
EC: 1.6.5.3
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Entity ID: 38
MoleculeChains Sequence LengthOrganismDetailsImage
Putative NADH:ubiquinone oxidoreductase 39 kDa subunitTB [auth 5P],
WF [auth P]
397Chlamydomonas reinhardtiiMutation(s): 0 
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Entity ID: 39
MoleculeChains Sequence LengthOrganismDetailsImage
NADH-ubiquinone oxidoreductase chain 1UB [auth 5Q],
XF [auth Q]
292Chlamydomonas reinhardtiiMutation(s): 0 
EC: 7.1.1.2
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Entity ID: 40
MoleculeChains Sequence LengthOrganismDetailsImage
NADH-ubiquinone oxidoreductase chain 2VB [auth 5R],
YF [auth R]
387Chlamydomonas reinhardtiiMutation(s): 0 
EC: 7.1.1.2
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Entity ID: 41
MoleculeChains Sequence LengthOrganismDetailsImage
NADH-ubiquinone oxidoreductase chain 3WB [auth 5S],
ZF [auth S]
279Chlamydomonas reinhardtiiMutation(s): 0 
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Entity ID: 42
MoleculeChains Sequence LengthOrganismDetailsImage
NADH-ubiquinone oxidoreductase chain 4AG [auth T],
XB [auth 5T]
443Chlamydomonas reinhardtiiMutation(s): 0 
EC: 7.1.1.2
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Entity ID: 43
MoleculeChains Sequence LengthOrganismDetailsImage
NADH dehydrogenase subunit 4LBG [auth U],
YB [auth 5U]
227Chlamydomonas reinhardtiiMutation(s): 0 
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Entity ID: 44
MoleculeChains Sequence LengthOrganismDetailsImage
NADH-ubiquinone oxidoreductase chain 5CG [auth V],
ZB [auth 5V]
546Chlamydomonas reinhardtiiMutation(s): 0 
EC: 7.1.1.2
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Entity ID: 45
MoleculeChains Sequence LengthOrganismDetailsImage
NADH-ubiquinone oxidoreductase chain 6AC [auth 5W],
DG [auth W]
162Chlamydomonas reinhardtiiMutation(s): 0 
EC: 7.1.1.2
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Entity ID: 46
MoleculeChains Sequence LengthOrganismDetailsImage
ASHIBC [auth 5X],
EG [auth X]
149Chlamydomonas reinhardtiiMutation(s): 0 
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Entity ID: 47
MoleculeChains Sequence LengthOrganismDetailsImage
P9CC [auth 5Y],
FG [auth Y]
64Chlamydomonas reinhardtiiMutation(s): 0 
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Entity ID: 48
MoleculeChains Sequence LengthOrganismDetailsImage
KFYIDC [auth 5Z],
GG [auth Z]
124Chlamydomonas reinhardtiiMutation(s): 0 
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Entity ID: 49
MoleculeChains Sequence LengthOrganismDetailsImage
AGGGEC [auth 5a],
HG [auth a]
129Chlamydomonas reinhardtiiMutation(s): 0 
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Entity ID: 50
MoleculeChains Sequence LengthOrganismDetailsImage
ESSSFC [auth 5b],
IG [auth b]
172Chlamydomonas reinhardtiiMutation(s): 0 
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Entity ID: 51
MoleculeChains Sequence LengthOrganismDetailsImage
B9GC [auth 5c],
JG [auth c]
67Chlamydomonas reinhardtiiMutation(s): 0 
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Entity ID: 52
MoleculeChains Sequence LengthOrganismDetailsImage
Mitochondrial NADH:ubiquinone oxidoreductase 10 kDa subunitHC [auth 5d],
KG [auth d]
86Chlamydomonas reinhardtiiMutation(s): 0 
EC: 1.6.5.3 (PDB Primary Data), 1.6.99.3 (PDB Primary Data)
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Entity ID: 53
MoleculeChains Sequence LengthOrganismDetailsImage
Mitochondrial NADH:ubiquinone oxidoreductase 23 kDa subunitIC [auth 5e],
LG [auth e]
219Chlamydomonas reinhardtiiMutation(s): 0 
EC: 1.6.5.3 (PDB Primary Data), 1.6.99.3 (PDB Primary Data)
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Entity ID: 54
MoleculeChains Sequence LengthOrganismDetailsImage
Mitochondrial NADH:ubiquinone oxidoreductase 7.5 kDa subunitJC [auth 5f],
MG [auth f]
65Chlamydomonas reinhardtiiMutation(s): 0 
EC: 1.6.5.3 (PDB Primary Data), 1.6.99.3 (PDB Primary Data)
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Entity ID: 55
MoleculeChains Sequence LengthOrganismDetailsImage
Mitochondrial putative NADH:ubiquinone oxidoreductase 6.5 kDa subunitKC [auth 5g],
NG [auth g]
55Chlamydomonas reinhardtiiMutation(s): 0 
EC: 1.6.5.3 (PDB Primary Data), 1.6.99.3 (PDB Primary Data)
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Entity ID: 56
MoleculeChains Sequence LengthOrganismDetailsImage
Mitochondrial NADH:ubiquinone oxidoreductase 13 kDa subunitLC [auth 5h],
OG [auth h]
142Chlamydomonas reinhardtiiMutation(s): 0 
EC: 1.6.5.3 (PDB Primary Data), 1.6.99.3 (PDB Primary Data)
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Entity ID: 57
MoleculeChains Sequence LengthOrganismDetailsImage
NADH:ubiquinone oxidoreductase 15 kDa subunit-likeMC [auth 5i],
PG [auth i]
81Chlamydomonas reinhardtiiMutation(s): 0 
EC: 1.6.5.3 (PDB Primary Data), 1.6.99.3 (PDB Primary Data)
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Entity ID: 58
MoleculeChains Sequence LengthOrganismDetailsImage
NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7NC [auth 5j],
QG [auth j]
86Chlamydomonas reinhardtiiMutation(s): 0 
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Entity ID: 59
MoleculeChains Sequence LengthOrganismDetailsImage
NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9OC [auth 5k],
RG [auth k]
117Chlamydomonas reinhardtiiMutation(s): 0 
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Entity ID: 60
MoleculeChains Sequence LengthOrganismDetailsImage
NADH:ubiquinone oxidoreductase 20,9 kD-like subunitPC [auth 5l],
SG [auth l]
121Chlamydomonas reinhardtiiMutation(s): 0 
EC: 1.6.5.3 (PDB Primary Data), 1.6.99.3 (PDB Primary Data)
UniProt
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Entity ID: 61
MoleculeChains Sequence LengthOrganismDetailsImage
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13QC [auth 5m],
TG [auth m]
142Chlamydomonas reinhardtiiMutation(s): 0 
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Entity ID: 62
MoleculeChains Sequence LengthOrganismDetailsImage
Putative NADH:ubiquinone oxidoreductase 12.5 kDa subunitRC [auth 5n],
UG [auth n]
106Chlamydomonas reinhardtiiMutation(s): 0 
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Entity ID: 63
MoleculeChains Sequence LengthOrganismDetailsImage
Putative NADH:ubiquinone oxidoreductase 17.8 kDa subunitSC [auth 5o],
VG [auth o]
155Chlamydomonas reinhardtiiMutation(s): 0 
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Entity ID: 64
MoleculeChains Sequence LengthOrganismDetailsImage
Mitochondrial NADH:ubiquinone oxidoreductase 16 kDa subunitTC [auth 5p],
WG [auth p]
130Chlamydomonas reinhardtiiMutation(s): 0 
EC: 1.6.5.3 (PDB Primary Data), 1.6.99.3 (PDB Primary Data)
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Entity ID: 65
MoleculeChains Sequence LengthOrganismDetailsImage
Mitochondrial NADH:ubiquinone oxidoreductase 19 kDa subunitUC [auth 5q],
XG [auth q]
197Chlamydomonas reinhardtiiMutation(s): 0 
EC: 1.6.5.3 (PDB Primary Data), 1.6.99.3 (PDB Primary Data)
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Entity ID: 66
MoleculeChains Sequence LengthOrganismDetailsImage
Mitochondrial NADH:ubiquinone oxidoreductase 32 kDa subunitWC [auth 5s],
ZG [auth s]
312Chlamydomonas reinhardtiiMutation(s): 0 
EC: 1.6.5.3 (PDB Primary Data), 1.6.99.3 (PDB Primary Data)
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Entity ID: 67
MoleculeChains Sequence LengthOrganismDetailsImage
CAG2 - CA-likeAH [auth t],
XC [auth 5t]
279Chlamydomonas reinhardtiiMutation(s): 0 
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Entity ID: 68
MoleculeChains Sequence LengthOrganismDetailsImage
CAG1BH [auth u],
YC [auth 5u]
229Chlamydomonas reinhardtiiMutation(s): 0 
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Entity ID: 69
MoleculeChains Sequence LengthOrganismDetailsImage
P10CH [auth v],
ZC [auth 5v]
45Chlamydomonas reinhardtiiMutation(s): 0 
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Entity ID: 70
MoleculeChains Sequence LengthOrganismDetailsImage
Mitochondrial NADH:ubiquinone oxidoreductase 9 kDa subunitAD [auth 5w],
DH [auth w]
109Chlamydomonas reinhardtiiMutation(s): 0 
EC: 1.6.5.3 (PDB Primary Data), 1.6.99.3 (PDB Primary Data)
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Entity ID: 71
MoleculeChains Sequence LengthOrganismDetailsImage
NUOP8BD [auth 5x],
EH [auth x]
157Chlamydomonas reinhardtiiMutation(s): 0 
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Entity ID: 72
MoleculeChains Sequence LengthOrganismDetailsImage
NUOP7CD [auth 5y],
FH [auth y]
118Chlamydomonas reinhardtiiMutation(s): 0 
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Small Molecules
Ligands 13 Unique
IDChains Name / Formula / InChI Key2D Diagram3D Interactions
HEA
Query on HEA

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AJ [auth 7A]
BI [auth 4A]
EJ [auth 8A]
HJ [auth 8A]
KJ [auth 9A]
AJ [auth 7A],
BI [auth 4A],
EJ [auth 8A],
HJ [auth 8A],
KJ [auth 9A],
LJ [auth 9A],
OH [auth 2A],
PH [auth 2A],
TH [auth 3A],
WH [auth 3A],
ZH [auth 4A],
ZI [auth 7A]
HEME-A
C49 H56 Fe N4 O6
ZGGYGTCPXNDTRV-PRYGPKJJSA-L
COO
Query on COO

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AK [auth s],
PI [auth 5s]
CROTONYL COENZYME A
C25 H40 N7 O17 P3 S
KFWWCMJSYSSPSK-XBTRWLRFSA-N
NDP
Query on NDP

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NI [auth 5P],
YJ [auth P]
NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
C21 H30 N7 O17 P3
ACFIXJIJDZMPPO-NNYOXOHSSA-N
HEC
Query on HEC

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KH [auth 1E],
LH [auth 1F],
VI [auth 6E],
WI [auth 6F]
HEME C
C34 H34 Fe N4 O4
HXQIYSLZKNYNMH-LJNAALQVSA-N
HEM
Query on HEM

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GH [auth 1A]
HH [auth 1A]
IH [auth 1B]
JH [auth 1B]
RI [auth 6A]
GH [auth 1A],
HH [auth 1A],
IH [auth 1B],
JH [auth 1B],
RI [auth 6A],
SI [auth 6A],
TI [auth 6B],
UI [auth 6B]
PROTOPORPHYRIN IX CONTAINING FE
C34 H32 Fe N4 O4
KABFMIBPWCXCRK-RGGAHWMASA-L
8Q1
Query on 8Q1

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MI [auth 5J],
OI [auth 5k],
XJ [auth J],
ZJ [auth k]
S-[2-({N-[(2R)-2-hydroxy-3,3-dimethyl-4-(phosphonooxy)butanoyl]-beta-alanyl}amino)ethyl] dodecanethioate
C23 H45 N2 O8 P S
MVHUOSAYFQKAMT-NRFANRHFSA-N
FMN
Query on FMN

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EI [auth 5B],
QJ [auth B]
FLAVIN MONONUCLEOTIDE
C17 H21 N4 O9 P
FVTCRASFADXXNN-SCRDCRAPSA-N
SF4
Query on SF4

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FI [auth 5B]
HI [auth 5C]
II [auth 5C]
JI [auth 5F]
KI [auth 5G]
FI [auth 5B],
HI [auth 5C],
II [auth 5C],
JI [auth 5F],
KI [auth 5G],
LI [auth 5G],
PJ [auth B],
RJ [auth C],
SJ [auth C],
UJ [auth F],
VJ [auth G],
WJ [auth G]
IRON/SULFUR CLUSTER
Fe4 S4
LJBDFODJNLIPKO-UHFFFAOYSA-N
FES
Query on FES

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DI [auth 5A],
GI [auth 5C],
OJ [auth A],
TJ [auth C]
FE2/S2 (INORGANIC) CLUSTER
Fe2 S2
NIXDOXVAJZFRNF-UHFFFAOYSA-N
CUA
Query on CUA

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CI [auth 4C]
DJ [auth 7C]
IJ [auth 8C]
NJ [auth 9C]
SH [auth 2C]
CI [auth 4C],
DJ [auth 7C],
IJ [auth 8C],
NJ [auth 9C],
SH [auth 2C],
XH [auth 3C]
DINUCLEAR COPPER ION
Cu2
ALKZAGKDWUSJED-UHFFFAOYSA-N
ZN
Query on ZN

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BK [auth s]
MH [auth 1M]
NH [auth 1N]
QI [auth 5s]
XI [auth 6M]
BK [auth s],
MH [auth 1M],
NH [auth 1N],
QI [auth 5s],
XI [auth 6M],
YI [auth 6N]
ZINC ION
Zn
PTFCDOFLOPIGGS-UHFFFAOYSA-N
CU
Query on CU

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BJ [auth 7A]
FJ [auth 8A]
MJ [auth 9A]
QH [auth 2A]
UH [auth 3A]
BJ [auth 7A],
FJ [auth 8A],
MJ [auth 9A],
QH [auth 2A],
UH [auth 3A],
YH [auth 4A]
COPPER (II) ION
Cu
JPVYNHNXODAKFH-UHFFFAOYSA-N
MG
Query on MG

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AI [auth 4A]
CJ [auth 7A]
GJ [auth 8A]
JJ [auth 9A]
RH [auth 2A]
AI [auth 4A],
CJ [auth 7A],
GJ [auth 8A],
JJ [auth 9A],
RH [auth 2A],
VH [auth 3A]
MAGNESIUM ION
Mg
JLVVSXFLKOJNIY-UHFFFAOYSA-N
Experimental Data & Validation

Experimental Data

  • Method: ELECTRON MICROSCOPY
  • Resolution: 5.44 Å
  • Aggregation State: CELL 
  • Reconstruction Method: SUBTOMOGRAM AVERAGING 
EM Software:
TaskSoftware PackageVersion
RECONSTRUCTIONRELION4

Structure Validation

View Full Validation Report



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
Alexander von Humboldt FoundationGermany--
Swiss National Science FoundationSwitzerland210561

Revision History  (Full details and data files)

  • Version 1.0: 2025-03-12
    Type: Initial release
  • Version 1.1: 2025-04-02
    Changes: Data collection, Database references