8UJM

Crystal structure of human CTDNEP1-NEP1R1 protein phosphatase complex with magnesium

  • Classification: HYDROLASE
  • Organism(s): Homo sapiens
  • Expression System: Escherichia coli
  • Mutation(s): No 

  • Deposited: 2023-10-11 Released: 2024-05-15 
  • Deposition Author(s): Gao, S., Airola, M.V.
  • Funding Organization(s): National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)

Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.16 Å
  • R-Value Free: 0.221 
  • R-Value Work: 0.197 
  • R-Value Observed: 0.198 

wwPDB Validation   3D Report Full Report


This is version 1.0 of the entry. See complete history


Literature

Structure and mechanism of the human CTDNEP1-NEP1R1 protein phosphatase complex necessary to maintain ER membrane morphology

Gao, S.Carrasquillo-Rodriguez, J.W.Bahmanyar, S.Airola, M.V.

To be published.

Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
CTD nuclear envelope phosphatase 1,Nuclear envelope phosphatase-regulatory subunit 1
A, B
276Homo sapiensMutation(s): 0 
Gene Names: CTDNEP1CNEP1R1
UniProt & NIH Common Fund Data Resources
Find proteins for O95476 (Homo sapiens)
Explore O95476 
Go to UniProtKB:  O95476
PHAROS:  O95476
GTEx:  ENSG00000175826 
Find proteins for H3BUT5 (Homo sapiens)
Explore H3BUT5 
Go to UniProtKB:  H3BUT5
GTEx:  ENSG00000205423 
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupsO95476H3BUT5
Sequence Annotations
Expand
  • Reference Sequence
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.16 Å
  • R-Value Free: 0.221 
  • R-Value Work: 0.197 
  • R-Value Observed: 0.198 
  • Space Group: P 1 21 1
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 56.405α = 90
b = 102.953β = 118.2
c = 57.244γ = 90
Software Package:
Software NamePurpose
PHENIXrefinement
autoPROCdata reduction
autoPROCdata scaling
PHENIXphasing

Structure Validation

View Full Validation Report



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)United StatesR35GM128666

Revision History  (Full details and data files)

  • Version 1.0: 2024-05-15
    Type: Initial release