Multimodal tubulin binding by the yeast kinesin-8, Kip3, underlies its motility and depolymerization
Arellano-Santoyo, H., Hernandez-Lopez, R.A., Stokasimov, E., Wang, R.Y.-R., Pellman, D., Lesczhiner, A.E.(2024) Biorxiv 
Experimental Data Snapshot
wwPDB Validation   3D Report Full Report
(2024) Biorxiv 
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Tubulin alpha-1B chain | 451 | Sus scrofa | Mutation(s): 0  | ||
UniProt | |||||
Find proteins for Q2XVP4 (Sus scrofa) Explore Q2XVP4  Go to UniProtKB:  Q2XVP4 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q2XVP4 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 2 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Tubulin beta chain | 445 | Sus scrofa | Mutation(s): 0  | ||
UniProt | |||||
Find proteins for P02554 (Sus scrofa) Explore P02554  Go to UniProtKB:  P02554 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P02554 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 3 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
kinesin-8/ Kip3 | 355 | Saccharomyces cerevisiae | Mutation(s): 0  | ||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
Sequence AnnotationsExpand | |||||
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Ligands 4 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
GTP (Subject of Investigation/LOI) Query on GTP | BA [auth A] FB [auth L] HA [auth C] LB [auth N] NA [auth E] | GUANOSINE-5'-TRIPHOSPHATE C10 H16 N5 O14 P3 XKMLYUALXHKNFT-UUOKFMHZSA-N | |||
G2P (Subject of Investigation/LOI) Query on G2P | BB [auth J] DA [auth B] HB [auth M] JA [auth D] NB [auth O] | PHOSPHOMETHYLPHOSPHONIC ACID GUANYLATE ESTER C11 H18 N5 O13 P3 GXTIEXDFEKYVGY-KQYNXXCUSA-N | |||
ANP (Subject of Investigation/LOI) Query on ANP | BC [auth h] DB [auth d] FA [auth K] JB [auth e] LA [auth a] | PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER C10 H17 N6 O12 P3 PVKSNHVPLWYQGJ-KQYNXXCUSA-N | |||
MG (Subject of Investigation/LOI) Query on MG | AB [auth I] AC [auth S] CA [auth A] CB [auth J] CC [auth h] | MAGNESIUM ION Mg JLVVSXFLKOJNIY-UHFFFAOYSA-N |
Task | Software Package | Version |
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MODEL REFINEMENT | Rosetta | |
RECONSTRUCTION | FREALIGN |
Funding Organization | Location | Grant Number |
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Not funded | -- |