7P3Q

Streptomyces coelicolor dATP/ATP-loaded NrdR octamer


Experimental Data Snapshot

  • Method: ELECTRON MICROSCOPY
  • Resolution: 3.12 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 

wwPDB Validation 

Currently 7P3Q does not have a validation slider image.


This is version 1.0 of the entry. See complete history


Literature

Evolutionarily mobile ATP-cones control both transcription and activity of an essential enzyme family

Grinberg, I.R.Martinez-Carranza, M.Bimai, O.Nouairia, G.Lundin, D.Logan, D.T.Sjoberg, B.M.Stenmark, P.

To be published.

Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChainsSequence LengthOrganismDetailsImage
Transcriptional repressor NrdR195Streptomyces coelicolor A3(2)Mutation(s): 0 
Gene Names: nrdRSCO5804SC4H2.25
UniProt
Find proteins for O69980 (Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145))
Explore O69980 
Go to UniProtKB:  O69980
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupO69980
Protein Feature View
Expand
  • Reference Sequence
Small Molecules
Ligands 3 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
ATP (Subject of Investigation/LOI)
Query on ATP

Download Ideal Coordinates CCD File 
AA [auth F],
DA [auth H],
I [auth A],
L [auth C],
O [auth E],
AA [auth F],
DA [auth H],
I [auth A],
L [auth C],
O [auth E],
R [auth G],
U [auth B],
X [auth D]
ADENOSINE-5'-TRIPHOSPHATE
C10 H16 N5 O13 P3
ZKHQWZAMYRWXGA-KQYNXXCUSA-N
 Ligand Interaction
DTP (Subject of Investigation/LOI)
Query on DTP

Download Ideal Coordinates CCD File 
BA [auth F],
EA [auth H],
J [auth A],
M [auth C],
P [auth E],
BA [auth F],
EA [auth H],
J [auth A],
M [auth C],
P [auth E],
S [auth G],
V [auth B],
Y [auth D]
2'-DEOXYADENOSINE 5'-TRIPHOSPHATE
C10 H16 N5 O12 P3
SUYVUBYJARFZHO-RRKCRQDMSA-N
 Ligand Interaction
ZN
Query on ZN

Download Ideal Coordinates CCD File 
CA [auth F],
FA [auth H],
K [auth A],
N [auth C],
Q [auth E],
CA [auth F],
FA [auth H],
K [auth A],
N [auth C],
Q [auth E],
T [auth G],
W [auth B],
Z [auth D]
ZINC ION
Zn
PTFCDOFLOPIGGS-UHFFFAOYSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: ELECTRON MICROSCOPY
  • Resolution: 3.12 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 

Structure Validation

Currently 7P3Q does not have a validation slider image.




Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
Swedish Research CouncilSweden2018-03406
Swedish Research CouncilSweden2019-01400
Wenner-Gren FoundationSweden--
CancerfondenSweden20 1287 PjF
CancerfondenSweden2018/820

Revision History  (Full details and data files)

  • Version 1.0: 2022-05-11
    Type: Initial release