Structure of a Glycosyltransferase from Leptospira borgpetersenii serovar Hardjo-bovis (strain JB197)
Abendroth, J., Conrady, D.G., Lorimer, D.D., Horanyi, P.S., Edwards, T.E.To be published.
Experimental Data Snapshot
wwPDB Validation   3D Report Full Report
Entity ID: 1 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
Glycosyltransferase | 228 | Leptospira borgpetersenii serovar Hardjo-bovis str. JB197 | Mutation(s): 0  Gene Names: LBJ_1113 | ![]() | |
UniProt | |||||
Find proteins for Q04TP4 (Leptospira borgpetersenii serovar Hardjo-bovis (strain JB197)) Explore Q04TP4  Go to UniProtKB:  Q04TP4 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q04TP4 | ||||
Protein Feature ViewExpand | |||||
|
Ligands 3 Unique | |||||
---|---|---|---|---|---|
ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
CIT Query on CIT | G [auth A] H [auth A] M [auth B] Q [auth C] V [auth D] | CITRIC ACID C6 H8 O7 KRKNYBCHXYNGOX-UHFFFAOYSA-N | Ligand Interaction | ||
GOL Query on GOL | I [auth A], Y [auth D] | GLYCEROL C3 H8 O3 PEDCQBHIVMGVHV-UHFFFAOYSA-N | Ligand Interaction | ||
EDO Query on EDO | E [auth A] F [auth A] J [auth A] K [auth B] L [auth B] | 1,2-ETHANEDIOL C2 H6 O2 LYCAIKOWRPUZTN-UHFFFAOYSA-N | Ligand Interaction |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 56.25 | α = 90 |
b = 123.17 | β = 92.44 |
c = 76.77 | γ = 90 |
Software Name | Purpose |
---|---|
XDS | data reduction |
XSCALE | data scaling |
PHENIX | refinement |
PDB_EXTRACT | data extraction |
MR-Rosetta | phasing |
Coot | model building |