6HPV

Crystal structure of mouse fetuin-B


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.3 Å
  • R-Value Free: 0.253 
  • R-Value Work: 0.224 

wwPDB Validation 3D Report Full Report


This is version 1.1 of the entry. See complete history

Literature

Structure of mammalian plasma fetuin-B and its mechanism of selective metallopeptidase inhibition.

Cuppari, A.Korschgen, H.Fahrenkamp, D.Schmitz, C.Guevara, T.Karmilin, K.Kuske, M.Olf, M.Dietzel, E.Yiallouros, I.de Sanctis, D.Goulas, T.Weiskirchen, R.Jahnen-Dechent, W.Floehr, J.Stoecker, W.Jovine, L.Gomis-Ruth, F.X.

(2019) Iucrj 6: 317-330


Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Fetuin-B
A
378Mus musculusMutation(s): 0 
Gene Names: Fetub
Find proteins for Q9QXC1 (Mus musculus)
Go to UniProtKB:  Q9QXC1
Small Molecules
Ligands 2 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
ACT
Query on ACT

Download SDF File 
Download CCD File 
A
ACETATE ION
C2 H3 O2
QTBSBXVTEAMEQO-UHFFFAOYSA-M
 Ligand Interaction
NAG
Query on NAG

Download SDF File 
Download CCD File 
A
N-ACETYL-D-GLUCOSAMINE
C8 H15 N O6
OVRNDRQMDRJTHS-FMDGEEDCSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.3 Å
  • R-Value Free: 0.253 
  • R-Value Work: 0.224 
  • Space Group: P 41 21 2
Unit Cell:
Length (Å)Angle (°)
a = 67.710α = 90.00
b = 67.710β = 90.00
c = 197.810γ = 90.00
Software Package:
Software NamePurpose
CRANK2phasing
Cootmodel building
PHENIXmodel building
PHENIXrefinement
XDSdata reduction
XSCALEdata scaling

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
Swedish Research CouncilSweden2016-03999
European Molecular Biology OrganizationGermany--
German Research Foundation--

Revision History 

  • Version 1.0: 2019-02-20
    Type: Initial release
  • Version 1.1: 2019-03-27
    Type: Author supporting evidence, Data collection, Database references