6FH3

Protein arginine kinase McsB in the pArg-bound state


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.85 Å
  • R-Value Free: 0.216 
  • R-Value Work: 0.181 

wwPDB Validation 3D Report Full Report


This is version 1.2 of the entry. See complete history

Literature

Structure of McsB, a protein kinase for regulated arginine phosphorylation.

Suskiewicz, M.J.Hajdusits, B.Beveridge, R.Heuck, A.Vu, L.D.Kurzbauer, R.Hauer, K.Thoeny, V.Rumpel, K.Mechtler, K.Meinhart, A.Clausen, T.

(2019) Nat.Chem.Biol. --: --


Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Protein-arginine kinase
A, B
366Geobacillus stearothermophilusMutation(s): 0 
Gene Names: mcsB
EC: 2.7.14.1
Find proteins for P0DMM5 (Geobacillus stearothermophilus)
Go to UniProtKB:  P0DMM5
Small Molecules
Ligands 2 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
EDO
Query on EDO

Download SDF File 
Download CCD File 
A, B
1,2-ETHANEDIOL
ETHYLENE GLYCOL
C2 H6 O2
LYCAIKOWRPUZTN-UHFFFAOYSA-N
 Ligand Interaction
RPI
Query on RPI

Download SDF File 
Download CCD File 
A, B
phospho-arginine
C6 H15 N4 O5 P
CCTIOCVIZPCTGO-BYPYZUCNSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.85 Å
  • R-Value Free: 0.216 
  • R-Value Work: 0.181 
  • Space Group: P 1 21 1
Unit Cell:
Length (Å)Angle (°)
a = 49.000α = 90.00
b = 77.110β = 98.08
c = 94.130γ = 90.00
Software Package:
Software NamePurpose
XDSdata reduction
XSCALEdata scaling
Cootmodel building
PHENIXrefinement
PHASERphasing

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2019-02-27
    Type: Initial release
  • Version 1.1: 2019-04-10
    Type: Data collection, Database references
  • Version 1.2: 2019-04-17
    Type: Data collection, Database references