6C0Z

Crystal structure of Efga from Methylobacterium extorquens in complex with formaldehyde


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.83 Å
  • R-Value Free: 0.266 
  • R-Value Work: 0.222 

wwPDB Validation 3D Report Full Report


This is version 1.0 of the entry. See complete history

Literature

Crystal structure of Efga form Methylobacterium extorquens in complex with formaldehyde

Shamoo, Y.Davlieva, M.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Efga
B, A, C, D
164Methylorubrum extorquens DSM 13060Mutation(s): 0 
Find proteins for H1KGY6 (Methylorubrum extorquens DSM 13060)
Go to UniProtKB:  H1KGY6
Small Molecules
Ligands 2 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
FMT
Query on FMT

Download SDF File 
Download CCD File 
B
FORMIC ACID
C H2 O2
BDAGIHXWWSANSR-UHFFFAOYSA-N
 Ligand Interaction
21H
Query on 21H

Download SDF File 
Download CCD File 
A, C, D
oxydimethanol
C2 H6 O3
ARZLUCYKIWYSHR-UHFFFAOYSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.83 Å
  • R-Value Free: 0.266 
  • R-Value Work: 0.222 
  • Space Group: P 21 2 21
Unit Cell:
Length (Å)Angle (°)
a = 72.059α = 90.00
b = 72.063β = 90.00
c = 104.555γ = 90.00
Software Package:
Software NamePurpose
HKL-2000data scaling
HKL-2000data reduction
PDB_EXTRACTdata extraction
PHENIXrefinement
PHENIXphasing

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
United States--

Revision History 

  • Version 1.0: 2019-01-16
    Type: Initial release