6C0Z | pdb_00006c0z

Crystal structure of Efga from Methylobacterium extorquens in complex with formaldehyde

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
D	SCOP2 Family	GlcG-like	8101446	4003947	SCOP2 (2022-06-29)
D	SCOP2 Superfamily	GlcG-like	8101447	3001903	SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
D	Haem_degrading	e6c0zD1	A: a+b three layers	X: Profilin-like	H: GlcG-like (From Topology)	T: GlcG-like	F: Haem_degrading	ECOD (1.6)
C	Haem_degrading	e6c0zC1	A: a+b three layers	X: Profilin-like	H: GlcG-like (From Topology)	T: GlcG-like	F: Haem_degrading	ECOD (1.6)
B [auth A]	Haem_degrading	e6c0zA1	A: a+b three layers	X: Profilin-like	H: GlcG-like (From Topology)	T: GlcG-like	F: Haem_degrading	ECOD (1.6)
A [auth B]	Haem_degrading	e6c0zB1	A: a+b three layers	X: Profilin-like	H: GlcG-like (From Topology)	T: GlcG-like	F: Haem_degrading	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
D	3.30.450.150	Alpha Beta	2-Layer Sandwich	Beta-Lactamase	Haem-degrading domain	CATH (4.3.0)
C	3.30.450.150	Alpha Beta	2-Layer Sandwich	Beta-Lactamase	Haem-degrading domain	CATH (4.3.0)
B [auth A]	3.30.450.150	Alpha Beta	2-Layer Sandwich	Beta-Lactamase	Haem-degrading domain	CATH (4.3.0)
A [auth B]	3.30.450.150	Alpha Beta	2-Layer Sandwich	Beta-Lactamase	Haem-degrading domain	CATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A [auth B], B [auth A], C, D	Efga	-	-	cellular anatomical structure intracellular anatomical structure cytoplasm

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A [auth B], B [auth A], C, D	IPR038084	Corrinoid adenosyltransferase PduO/GlcC-like superfamily	Homologous Superfamily
A [auth B], B [auth A], C, D	IPR005624	Corrinoid adenosyltransferase PduO/GlcC-like	Family
A [auth B], B [auth A], C, D	IPR052517	GlcG-related carbohydrate metabolism protein	Family

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.