5ZYT

Crystal structure of human MGME1 with 3' overhang double strand DNA3


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.702 Å
  • R-Value Free: 0.296 
  • R-Value Work: 0.249 

wwPDB Validation 3D Report Full Report


This is version 1.0 of the entry. See complete history

Literature

crystal structure of human MGME1 with 3' overhang double strand DNA3

Yang, C.Gan, J.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure


Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Mitochondrial genome maintenance exonuclease 1
A, B, C, D
324Homo sapiensMutation(s): 0 
Gene Names: MGME1 (C20orf72, DDK1)
EC: 3.1.-.-
Find proteins for Q9BQP7 (Homo sapiens)
Go to Gene View: MGME1
Go to UniProtKB:  Q9BQP7
Entity ID: 2
MoleculeChainsLengthOrganism
DNA (5'-D(P*CP*TP*TP*CP*TP*TP*CP*C)-3')E,F,G,H18unidentified
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.702 Å
  • R-Value Free: 0.296 
  • R-Value Work: 0.249 
  • Space Group: C 1 2 1
Unit Cell:
Length (Å)Angle (°)
a = 146.497α = 90.00
b = 77.489β = 112.40
c = 164.714γ = 90.00
Software Package:
Software NamePurpose
PHENIXrefinement
PHASERphasing
HKL-3000data reduction
HKL-3000data scaling

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

  • Deposited Date: 2018-05-28 
  • Released Date: 2018-09-19 
  • Deposition Author(s): Yang, C., Gan, J.

Revision History 

  • Version 1.0: 2018-09-19
    Type: Initial release