MHC class I antigen
Rizkallah, P.J., Tungatt, K., Sewell, A.K.To be published.
Experimental Data Snapshot
wwPDB Validation 3D Report Full Report
Find similar proteins by: Sequence  |  Structure
Entity ID: 1 | ||||
---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details |
MHC class I antigen | A, D | 276 | Sus scrofa | Mutation(s): 0  Gene Names: SLA-1 |
Find proteins for B1PJV3 (Sus scrofa) Go to UniProtKB:  B1PJV3 |
Entity ID: 2 | ||||
---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details |
Beta-2-microglobulin | B, E | 100 | Homo sapiens | Mutation(s): 0  Gene Names: B2M |
Find proteins for P61769 (Homo sapiens) Go to Gene View: B2M Go to UniProtKB:  P61769 |
Entity ID: 3 | ||||
---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details |
ASP-PHE-GLU-ARG-GLU-GLY-TYR-SER-LEU | C, F | 9 | Influenza A virus (strain A/Goose/Guangdong/1/1996 H5N1 genotype Gs/Gd) | Mutation(s): 0  Gene Names: NP |
Find proteins for Q9Q0U8 (Influenza A virus (strain A/Goose/Guangdong/1/1996 H5N1 genotype Gs/Gd)) Go to UniProtKB:  Q9Q0U8 |
Ligands 3 Unique | |||||
---|---|---|---|---|---|
ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
SO4 Query on SO4 | E | SULFATE ION O4 S QAOWNCQODCNURD-UHFFFAOYSA-L | ![]() |  Ligand Interaction | |
GOL Query on GOL | E | GLYCEROL GLYCERIN; PROPANE-1,2,3-TRIOL C3 H8 O3 PEDCQBHIVMGVHV-UHFFFAOYSA-N | ![]() |  Ligand Interaction | |
EDO Query on EDO | A, B, E | 1,2-ETHANEDIOL ETHYLENE GLYCOL C2 H6 O2 LYCAIKOWRPUZTN-UHFFFAOYSA-N | ![]() |  Ligand Interaction |
Length (Å) | Angle (°) |
---|---|
a = 59.388 | α = 81.24 |
b = 60.288 | β = 67.59 |
c = 65.645 | γ = 67.94 |
Software Name | Purpose |
---|---|
REFMAC | refinement |
PDB_EXTRACT | data extraction |
Aimless | data scaling |
xia2 | data reduction |
PHASER | phasing |
DIALS | data reduction |