4V8P

T.thermophila 60S ribosomal subunit in complex with initiation factor 6.


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.52 Å
  • R-Value Free: 0.244 
  • R-Value Work: 0.216 
  • R-Value Observed: 0.216 

wwPDB Validation   3D Report Full Report


This is version 1.1 of the entry. See complete history


Literature

Crystal Structure of the Eukaryotic 60S Ribosomal Subunit in Complex with Initiation Factor 6.

Klinge, S.Voigts-Hoffmann, F.Leibundgut, M.Arpagaus, S.Ban, N.

(2011) Science 334: 941

  • DOI: 10.1126/science.1211204
  • Primary Citation of Related Structures:  
    4V8P

  • PubMed Abstract: 
  • Protein synthesis in all organisms is catalyzed by ribosomes. In comparison to their prokaryotic counterparts, eukaryotic ribosomes are considerably larger and are subject to more complex regulation. The large ribosomal subunit (60S) catalyzes peptide bond formation and contains the nascent polypeptide exit tunnel ...

    Protein synthesis in all organisms is catalyzed by ribosomes. In comparison to their prokaryotic counterparts, eukaryotic ribosomes are considerably larger and are subject to more complex regulation. The large ribosomal subunit (60S) catalyzes peptide bond formation and contains the nascent polypeptide exit tunnel. We present the structure of the 60S ribosomal subunit from Tetrahymena thermophila in complex with eukaryotic initiation factor 6 (eIF6), cocrystallized with the antibiotic cycloheximide (a eukaryotic-specific inhibitor of protein synthesis), at a resolution of 3.5 angstroms. The structure illustrates the complex functional architecture of the eukaryotic 60S subunit, which comprises an intricate network of interactions between eukaryotic-specific ribosomal protein features and RNA expansion segments. It reveals the roles of eukaryotic ribosomal protein elements in the stabilization of the active site and the extent of eukaryotic-specific differences in other functional regions of the subunit. Furthermore, it elucidates the molecular basis of the interaction with eIF6 and provides a structural framework for further studies of ribosome-associated diseases and the role of the 60S subunit in the initiation of protein synthesis.


    Organizational Affiliation

    Institute of Molecular Biology and Biophysics, ETH Zürich, Zürich, Switzerland.



Macromolecules

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Entity ID: 2
MoleculeChainsSequence LengthOrganismDetailsImage
RIBOSOMAL PROTEIN L37B [auth AA], WB [auth DA], QD [auth FA], KF [auth HA]94Tetrahymena thermophilaMutation(s): 0 
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Entity ID: 3
MoleculeChainsSequence LengthOrganismDetailsImage
RPL39C [auth AB], XB [auth DB], RD [auth FB], LF [auth HB]52Tetrahymena thermophilaMutation(s): 0 
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Entity ID: 4
MoleculeChainsSequence LengthOrganismDetailsImage
60S RIBOSOMAL PROTEIN L36AD [auth AC], YB [auth DC], SD [auth FC], MF [auth HC]109Tetrahymena thermophilaMutation(s): 0 
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Entity ID: 5
MoleculeChainsSequence LengthOrganismDetailsImage
RPL6E [auth AE], ZB [auth DE], TD [auth FE], NF [auth HE]191Tetrahymena thermophilaMutation(s): 0 
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Entity ID: 6
MoleculeChainsSequence LengthOrganismDetailsImage
RPL14F [auth AF], AC [auth DF], UD [auth FF], OF [auth HF]126Tetrahymena thermophilaMutation(s): 0 
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Entity ID: 7
MoleculeChainsSequence LengthOrganismDetailsImage
RPL30G [auth AG], BC [auth DG], VD [auth FG], PF [auth HG]104Tetrahymena thermophilaMutation(s): 0 
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Entity ID: 8
MoleculeChainsSequence LengthOrganismDetailsImage
RPL35AH [auth AH], CC [auth DH], WD [auth FH], QF [auth HH]113Tetrahymena thermophilaMutation(s): 0 
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Entity ID: 9
MoleculeChainsSequence LengthOrganismDetailsImage
TRANSLATION INITIATION FACTOR EIF-6, PUTATIVE FAMILY PROTEINI [auth AJ], DC [auth DJ], XD [auth FJ], RF [auth HJ]248Tetrahymena thermophilaMutation(s): 0 
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Entity ID: 10
MoleculeChainsSequence LengthOrganismDetailsImage
UBIQUITIN-60S RIBOSOMAL PROTEIN L40J [auth AK], EC [auth DK], YD [auth FK], SF [auth HK]129Tetrahymena thermophilaMutation(s): 0 
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Entity ID: 11
MoleculeChainsSequence LengthOrganismDetailsImage
RPL34K [auth AL], FC [auth DL], ZD [auth FL], TF [auth HL]123Tetrahymena thermophilaMutation(s): 0 
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Entity ID: 12
MoleculeChainsSequence LengthOrganismDetailsImage
RIBOSOMAL PROTEIN L22L [auth AM], GC [auth DM], AE [auth FM], UF [auth HM]118Tetrahymena thermophilaMutation(s): 0 
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Entity ID: 13
MoleculeChainsSequence LengthOrganismDetailsImage
RPL27M [auth AN], HC [auth DN], BE [auth FN], VF [auth HN]144Tetrahymena thermophilaMutation(s): 0 
Gene Names: RPL27
UniProt
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Entity ID: 14
MoleculeChainsSequence LengthOrganismDetailsImage
RPL28N [auth AO], IC [auth DO], CE [auth FO], WF [auth HO]134Tetrahymena thermophilaMutation(s): 0 
Gene Names: RPL28
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Entity ID: 15
MoleculeChainsSequence LengthOrganismDetailsImage
RPL38O [auth AP], JC [auth DP], DE [auth FP], XF [auth HP]89Tetrahymena thermophilaMutation(s): 0 
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Entity ID: 16
MoleculeChainsSequence LengthOrganismDetailsImage
60S RIBOSOMAL PROTEIN L36P [auth AQ], KC [auth DQ], EE [auth FQ], YF [auth HQ]104Tetrahymena thermophilaMutation(s): 0 
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Entity ID: 17
MoleculeChainsSequence LengthOrganismDetailsImage
RPL29Q [auth AT], LC [auth DT], FE [auth FT], ZF [auth HT]66Tetrahymena thermophilaMutation(s): 0 
Gene Names: RPL29
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Entity ID: 18
MoleculeChainsSequence LengthOrganismDetailsImage
RPL13R [auth AU], MC [auth DU], GE [auth FU], AG [auth HU]206Tetrahymena thermophilaMutation(s): 0 
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Entity ID: 19
MoleculeChainsSequence LengthOrganismDetailsImage
RPL18AS [auth AX], NC [auth DX], HE [auth FX], BG [auth HX]189Tetrahymena thermophilaMutation(s): 0 
Gene Names: RPL18ARPL20
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Entity ID: 22
MoleculeChainsSequence LengthOrganismDetailsImage
RPL8V [auth BA], WA [auth CA], QC [auth EA], KE [auth GA]264Tetrahymena thermophilaMutation(s): 0 
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Entity ID: 23
MoleculeChainsSequence LengthOrganismDetailsImage
RIBOSOMAL PROTEIN L3W [auth BB], XA [auth CB], RC [auth EB], LE [auth GB]391Tetrahymena thermophilaMutation(s): 0 
Gene Names: RPL3
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Entity ID: 24
MoleculeChainsSequence LengthOrganismDetailsImage
RPL4X [auth BC], YA [auth CC], SC [auth EC], ME [auth GC]410Tetrahymena thermophilaMutation(s): 0 
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Entity ID: 25
MoleculeChainsSequence LengthOrganismDetailsImage
60S RIBOSOMAL PROTEIN L11Y [auth BD], ZA [auth CD], TC [auth ED], NE [auth GD]172Tetrahymena thermophilaMutation(s): 0 
Gene Names: RPL11
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Entity ID: 26
MoleculeChainsSequence LengthOrganismDetailsImage
60S RIBOSOMAL PROTEIN L9Z [auth BE], AB [auth CE], UC [auth EE], OE [auth GE]188Tetrahymena thermophilaMutation(s): 0 
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Entity ID: 27
MoleculeChainsSequence LengthOrganismDetailsImage
RPL7AAA [auth BF], BB [auth CF], VC [auth EF], PE [auth GF]255Tetrahymena thermophilaMutation(s): 0 
Gene Names: RPL7ARPL8
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Entity ID: 28
MoleculeChainsSequence LengthOrganismDetailsImage
RPLP0BA [auth BG], CB [auth CG], WC [auth EG], QE [auth GG]123Tetrahymena thermophilaMutation(s): 0 
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Entity ID: 29
MoleculeChainsSequence LengthOrganismDetailsImage
60S RIBOSOMAL PROTEIN L10CA [auth BH], DB [auth CH], XC [auth EH], RE [auth GH]215Tetrahymena thermophilaMutation(s): 0 
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Entity ID: 30
MoleculeChainsSequence LengthOrganismDetailsImage
60S RIBOSOMAL PROTEIN L13ADA [auth BI], EB [auth CI], YC [auth EI], SE [auth GI]198Tetrahymena thermophilaMutation(s): 0 
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Entity ID: 31
MoleculeChainsSequence LengthOrganismDetailsImage
RPL23EA [auth BJ], FB [auth CJ], ZC [auth EJ], TE [auth GJ]141Tetrahymena thermophilaMutation(s): 0 
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Entity ID: 32
MoleculeChainsSequence LengthOrganismDetailsImage
60S RIBOSOMAL PROTEIN L27AFA [auth BK], GB [auth CK], AD [auth EK], UE [auth GK]149Tetrahymena thermophilaMutation(s): 0 
Gene Names: RPL27ARPL28
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Entity ID: 33
MoleculeChainsSequence LengthOrganismDetailsImage
RIBOSOMAL PROTEIN L15GA [auth BL], HB [auth CL], BD [auth EL], VE [auth GL]204Tetrahymena thermophilaMutation(s): 0 
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Entity ID: 34
MoleculeChainsSequence LengthOrganismDetailsImage
60S RIBOSOMAL PROTEIN L5HA [auth BM], IB [auth CM], CD [auth EM], WE [auth GM]301Tetrahymena thermophilaMutation(s): 0 
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Entity ID: 35
MoleculeChainsSequence LengthOrganismDetailsImage
RPL18IA [auth BN], JB [auth CN], DD [auth EN], XE [auth GN]181Tetrahymena thermophilaMutation(s): 0 
Gene Names: RPL18
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Entity ID: 36
MoleculeChainsSequence LengthOrganismDetailsImage
RPL19JA [auth BO], ED [auth EO], YE [auth GO]185Tetrahymena thermophilaMutation(s): 0 
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Entity ID: 37
MoleculeChainsSequence LengthOrganismDetailsImage
60S RIBOSOMAL PROTEIN L21KA [auth BP], LB [auth CP], FD [auth EP], ZE [auth GP]157Tetrahymena thermophilaMutation(s): 0 
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Entity ID: 38
MoleculeChainsSequence LengthOrganismDetailsImage
RPL17LA [auth BQ], MB [auth CQ], GD [auth EQ], AF [auth GQ]183Tetrahymena thermophilaMutation(s): 0 
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Entity ID: 39
MoleculeChainsSequence LengthOrganismDetailsImage
RPL23AMA [auth BR], NB [auth CR], HD [auth ER], BF [auth GR]150Tetrahymena thermophilaMutation(s): 0 
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Entity ID: 40
MoleculeChainsSequence LengthOrganismDetailsImage
RPL26NA [auth BS], OB [auth CS], ID [auth ES], CF [auth GS]135Tetrahymena thermophilaMutation(s): 0 
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Entity ID: 41
MoleculeChainsSequence LengthOrganismDetailsImage
RPL24OA [auth BT], PB [auth CT], JD [auth ET], DF [auth GT]158Tetrahymena thermophilaMutation(s): 0 
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Entity ID: 42
MoleculeChainsSequence LengthOrganismDetailsImage
RPL35PA [auth BU], QB [auth CU], KD [auth EU], EF [auth GU]124Tetrahymena thermophilaMutation(s): 0 
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Entity ID: 43
MoleculeChainsSequence LengthOrganismDetailsImage
60S RIBOSOMAL PROTEIN L7QA [auth BV], RB [auth CV], LD [auth EV], FF [auth GV]239Tetrahymena thermophilaMutation(s): 0 
Gene Names: RPL7
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Entity ID: 44
MoleculeChainsSequence LengthOrganismDetailsImage
60S RIBOSOMAL PROTEIN L31RA [auth BW], SB [auth CW], MD [auth EW], GF [auth GW]111Tetrahymena thermophilaMutation(s): 0 
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Entity ID: 45
MoleculeChainsSequence LengthOrganismDetailsImage
60S RIBOSOMAL PROTEIN L32SA [auth BX], TB [auth CX], ND [auth EX], HF [auth GX]134Tetrahymena thermophilaMutation(s): 0 
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Entity ID: 46
MoleculeChainsSequence LengthOrganismDetailsImage
RPL37ATA [auth BY], UB [auth CY], OD [auth EY], IF [auth GY]103Tetrahymena thermophilaMutation(s): 0 
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Entity ID: 47
MoleculeChainsSequence LengthOrganismDetailsImage
RPL19KB [auth CO]185Tetrahymena thermophilaMutation(s): 0 
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Entity ID: 1
MoleculeChainsLengthOrganismImage
26S RRNAA [auth A1], VB [auth D1], PD [auth F1], JF [auth H1]3354Tetrahymena thermophila
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Entity ID: 20
MoleculeChainsLengthOrganismImage
5.8S RRNAT [auth B2], UA [auth C2], OC [auth E2], IE [auth G2]154Tetrahymena thermophila
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Entity ID: 21
MoleculeChainsLengthOrganismImage
5S RRNAU [auth B3], VA [auth C3], PC [auth E3], JE [auth G3]120Tetrahymena thermophila
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Small Molecules
Ligands 2 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
ZN
Query on ZN

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AO [auth AL] , AOA [auth HK] , BHA [auth FK] , BOA [auth HL] , CHA [auth FL] , QP [auth CY] , RY [auth DA] , SY [auth DC] , 
AO [auth AL], AOA [auth HK], BHA [auth FK], BOA [auth HL], CHA [auth FL], QP [auth CY], RY [auth DA], SY [auth DC], TO [auth BY], TZ [auth EY], UN [auth AA], VY [auth DK], WY [auth DL], XN [auth AC], YGA [auth FA], YHA [auth GY], YN [auth AK], YNA [auth HA], ZGA [auth FC], ZNA [auth HC]
ZINC ION
Zn
PTFCDOFLOPIGGS-UHFFFAOYSA-N
 Ligand Interaction
MG
Query on MG

Download Ideal Coordinates CCD File 
AAA [auth F1] , ABA [auth F1] , ACA [auth F1] , ADA [auth F1] , AEA [auth F1] , AFA [auth F1] , AGA [auth F1] , AH [auth A1] , 
AAA [auth F1], ABA [auth F1], ACA [auth F1], ADA [auth F1], AEA [auth F1], AFA [auth F1], AGA [auth F1], AH [auth A1], AHA [auth FK], AI [auth A1], AIA [auth H1], AJ [auth A1], AJA [auth H1], AK [auth A1], AKA [auth H1], AL [auth A1], ALA [auth H1], AM [auth A1], AMA [auth H1], AN [auth A1], ANA [auth H1], AP [auth C3], AQ [auth D1], AR [auth D1], AS [auth D1], AT [auth D1], AU [auth D1], AV [auth D1], AW [auth D1], AX [auth D1], AY [auth D1], AZ [auth E2], BAA [auth F1], BBA [auth F1], BCA [auth F1], BDA [auth F1], BEA [auth F1], BFA [auth F1], BGA [auth F1], BH [auth A1], BI [auth A1], BIA [auth H1], BJ [auth A1], BJA [auth H1], BK [auth A1], BKA [auth H1], BL [auth A1], BLA [auth H1], BM [auth A1], BMA [auth H1], BN [auth A1], BNA [auth H1], BO [auth B2], BP [auth C3], BQ [auth D1], BR [auth D1], BS [auth D1], BT [auth D1], BU [auth D1], BV [auth D1], BW [auth D1], BX [auth D1], BY [auth D1], BZ [auth E2], CAA [auth F1], CBA [auth F1], CCA [auth F1], CDA [auth F1], CEA [auth F1], CFA [auth F1], CG [auth A1], CGA [auth F1], CH [auth A1], CI [auth A1], CIA [auth H1], CJ [auth A1], CJA [auth H1], CK [auth A1], CKA [auth H1], CL [auth A1], CLA [auth H1], CM [auth A1], CMA [auth H1], CN [auth A1], CNA [auth H1], CO [auth B2], COA [auth HT], CP [auth C3], CQ [auth D1], CR [auth D1], CS [auth D1], CT [auth D1], CU [auth D1], CV [auth D1], CW [auth D1], CX [auth D1], CY [auth D1], CZ [auth E2], DAA [auth F1], DBA [auth F1], DCA [auth F1], DDA [auth F1], DEA [auth F1], DFA [auth F1], DG [auth A1], DGA [auth F1], DH [auth A1], DHA [auth FT], DI [auth A1], DIA [auth H1], DJ [auth A1], DJA [auth H1], DK [auth A1], DKA [auth H1], DL [auth A1], DLA [auth H1], DM [auth A1], DMA [auth H1], DN [auth A1], DNA [auth H1], DO [auth B2], DP [auth C3], DQ [auth D1], DR [auth D1], DS [auth D1], DT [auth D1], DU [auth D1], DV [auth D1], DW [auth D1], DX [auth D1], DY [auth D1], DZ [auth E2], EAA [auth F1], EBA [auth F1], ECA [auth F1], EDA [auth F1], EEA [auth F1], EFA [auth F1], EG [auth A1], EGA [auth F1], EH [auth A1], EHA [auth G2], EI [auth A1], EIA [auth H1], EJ [auth A1], EJA [auth H1], EK [auth A1], EKA [auth H1], EL [auth A1], ELA [auth H1], EM [auth A1], EMA [auth H1], EN [auth A1], ENA [auth H1], EO [auth B2], EP [auth C3], EQ [auth D1], ER [auth D1], ES [auth D1], ET [auth D1], EU [auth D1], EV [auth D1], EW [auth D1], EX [auth D1], EY [auth D1], EZ [auth E2], FAA [auth F1], FBA [auth F1], FCA [auth F1], FDA [auth F1], FEA [auth F1], FFA [auth F1], FG [auth A1], FGA [auth F1], FH [auth A1], FHA [auth G2], FI [auth A1], FIA [auth H1], FJ [auth A1], FJA [auth H1], FK [auth A1], FKA [auth H1], FL [auth A1], FLA [auth H1], FM [auth A1], FMA [auth H1], FN [auth A1], FNA [auth H1], FO [auth B2], FP [auth C3], FQ [auth D1], FR [auth D1], FS [auth D1], FT [auth D1], FU [auth D1], FV [auth D1], FW [auth D1], FX [auth D1], FY [auth D1], FZ [auth E3], GAA [auth F1], GBA [auth F1], GCA [auth F1], GDA [auth F1], GEA [auth F1], GFA [auth F1], GG [auth A1], GGA [auth F1], GH [auth A1], GHA [auth G2], GI [auth A1], GIA [auth H1], GJ [auth A1], GJA [auth H1], GK [auth A1], GKA [auth H1], GL [auth A1], GLA [auth H1], GM [auth A1], GMA [auth H1], GN [auth A1], GNA [auth H1], GO [auth B2], GP [auth C3], GQ [auth D1], GR [auth D1], GS [auth D1], GT [auth D1], GU [auth D1], GV [auth D1], GW [auth D1], GX [auth D1], GY [auth D1], GZ [auth E3], HAA [auth F1], HBA [auth F1], HCA [auth F1], HDA [auth F1], HEA [auth F1], HFA [auth F1], HG [auth A1], HGA [auth F1], HH [auth A1], HHA [auth G2], HI [auth A1], HIA [auth H1], HJ [auth A1], HJA [auth H1], HK [auth A1], HKA [auth H1], HL [auth A1], HLA [auth H1], HM [auth A1], HMA [auth H1], HN [auth A1], HNA [auth H1], HO [auth B2], HP [auth CD], HQ [auth D1], HR [auth D1], HS [auth D1], HT [auth D1], HU [auth D1], HV [auth D1], HW [auth D1], HX [auth D1], HY [auth D1], HZ [auth E3], IAA [auth F1], IBA [auth F1], ICA [auth F1], IDA [auth F1], IEA [auth F1], IFA [auth F1], IG [auth A1], IGA [auth F1], IH [auth A1], IHA [auth G2], II [auth A1], IIA [auth H1], IJ [auth A1], IJA [auth H1], IK [auth A1], IKA [auth H1], IL [auth A1], ILA [auth H1], IM [auth A1], IMA [auth H1], IN [auth A1], INA [auth H1], IO [auth B2], IP [auth CJ], IQ [auth D1], IR [auth D1], IS [auth D1], IT [auth D1], IU [auth D1], IV [auth D1], IW [auth D1], IX [auth D1], IY [auth D1], IZ [auth E3], JAA [auth F1], JBA [auth F1], JCA [auth F1], JDA [auth F1], JEA [auth F1], JFA [auth F1], JG [auth A1], JGA [auth F1], JH [auth A1], JHA [auth G2], JI [auth A1], JIA [auth H1], JJ [auth A1], JJA [auth H1], JK [auth A1], JKA [auth H1], JL [auth A1], JLA [auth H1], JM [auth A1], JMA [auth H1], JN [auth A1], JNA [auth H1], JO [auth B3], JP [auth CL], JQ [auth D1], JR [auth D1], JS [auth D1], JT [auth D1], JU [auth D1], JV [auth D1], JW [auth D1], JX [auth D1], JY [auth D1], JZ [auth E3], KAA [auth F1], KBA [auth F1], KCA [auth F1], KDA [auth F1], KEA [auth F1], KFA [auth F1], KG [auth A1], KGA [auth F1], KH [auth A1], KHA [auth G3], KI [auth A1], KIA [auth H1], KJ [auth A1], KJA [auth H1], KK [auth A1], KKA [auth H1], KL [auth A1], KLA [auth H1], KM [auth A1], KMA [auth H1], KN [auth A1], KNA [auth H1], KO [auth B3], KP [auth CL], KQ [auth D1], KR [auth D1], KS [auth D1], KT [auth D1], KU [auth D1], KV [auth D1], KW [auth D1], KX [auth D1], KY [auth D1], KZ [auth E3], LAA [auth F1], LBA [auth F1], LCA [auth F1], LDA [auth F1], LEA [auth F1], LFA [auth F1], LG [auth A1], LGA [auth F1], LH [auth A1], LHA [auth G3], LI [auth A1], LIA [auth H1], LJ [auth A1], LJA [auth H1], LK [auth A1], LKA [auth H1], LL [auth A1], LLA [auth H1], LM [auth A1], LMA [auth H1], LN [auth A1], LNA [auth H1], LO [auth B3], LP [auth CN], LQ [auth D1], LR [auth D1], LS [auth D1], LT [auth D1], LU [auth D1], LV [auth D1], LW [auth D1], LX [auth D1], LY [auth D1], LZ [auth EJ], MAA [auth F1], MBA [auth F1], MCA [auth F1], MDA [auth F1], MEA [auth F1], MFA [auth F1], MG [auth A1], MGA [auth F1], MH [auth A1], MHA [auth G3], MI [auth A1], MIA [auth H1], MJ [auth A1], MJA [auth H1], MK [auth A1], MKA [auth H1], ML [auth A1], MLA [auth H1], MM [auth A1], MMA [auth H1], MN [auth A1], MNA [auth H1], MO [auth BJ], MP [auth CQ], MQ [auth D1], MR [auth D1], MS [auth D1], MT [auth D1], MU [auth D1], MV [auth D1], MW [auth D1], MX [auth D1], MY [auth D1], MZ [auth EL], NAA [auth F1], NBA [auth F1], NCA [auth F1], NDA [auth F1], NEA [auth F1], NFA [auth F1], NG [auth A1], NGA [auth F1], NH [auth A1], NHA [auth G3], NI [auth A1], NIA [auth H1], NJ [auth A1], NJA [auth H1], NK [auth A1], NKA [auth H1], NL [auth A1], NLA [auth H1], NM [auth A1], NMA [auth H1], NN [auth A1], NNA [auth H1], NO [auth BL], NP [auth CQ], NQ [auth D1], NR [auth D1], NS [auth D1], NT [auth D1], NU [auth D1], NV [auth D1], NW [auth D1], NX [auth D1], NY [auth D1], NZ [auth EL], OAA [auth F1], OBA [auth F1], OCA [auth F1], ODA [auth F1], OEA [auth F1], OFA [auth F1], OG [auth A1], OGA [auth F1], OH [auth A1], OHA [auth G3], OI [auth A1], OIA [auth H1], OJ [auth A1], OJA [auth H1], OK [auth A1], OKA [auth H1], OL [auth A1], OLA [auth H1], OM [auth A1], OMA [auth H1], ON [auth A1], ONA [auth H1], OO [auth BN], OP [auth CW], OQ [auth D1], OR [auth D1], OS [auth D1], OT [auth D1], OU [auth D1], OV [auth D1], OW [auth D1], OX [auth D1], OY [auth D1], OZ [auth EN], PAA [auth F1], PBA [auth F1], PCA [auth F1], PDA [auth F1], PEA [auth F1], PFA [auth F1], PG [auth A1], PGA [auth F1], PH [auth A1], PHA [auth GA], PI [auth A1], PIA [auth H1], PJ [auth A1], PJA [auth H1], PK [auth A1], PKA [auth H1], PL [auth A1], PLA [auth H1], PM [auth A1], PMA [auth H1], PN [auth A1], PNA [auth H1], PO [auth BP], PP [auth CY], PQ [auth D1], PR [auth D1], PS [auth D1], PT [auth D1], PU [auth D1], PV [auth D1], PW [auth D1], PX [auth D1], PY [auth DA], PZ [auth EN], QAA [auth F1], QBA [auth F1], QCA [auth F1], QDA [auth F1], QEA [auth F1], QFA [auth F1], QG [auth A1], QGA [auth F1], QH [auth A1], QHA [auth GJ], QI [auth A1], QIA [auth H1], QJ [auth A1], QJA [auth H1], QK [auth A1], QKA [auth H1], QL [auth A1], QLA [auth H1], QM [auth A1], QMA [auth H1], QN [auth A1], QNA [auth H1], QO [auth BQ], QQ [auth D1], QR [auth D1], QS [auth D1], QT [auth D1], QU [auth D1], QV [auth D1], QW [auth D1], QX [auth D1], QY [auth DA], QZ [auth EQ], RAA [auth F1], RBA [auth F1], RCA [auth F1], RDA [auth F1], REA [auth F1], RFA [auth F1], RG [auth A1], RGA [auth F1], RH [auth A1], RHA [auth GL], RI [auth A1], RIA [auth H1], RJ [auth A1], RJA [auth H1], RK [auth A1], RKA [auth H1], RL [auth A1], RLA [auth H1], RM [auth A1], RMA [auth H1], RN [auth A1], RNA [auth H1], RO [auth BQ], RP [auth D1], RQ [auth D1], RR [auth D1], RS [auth D1], RT [auth D1], RU [auth D1], RV [auth D1], RW [auth D1], RX [auth D1], RZ [auth EW], SAA [auth F1], SBA [auth F1], SCA [auth F1], SDA [auth F1], SEA [auth F1], SFA [auth F1], SG [auth A1], SGA [auth F1], SH [auth A1], SHA [auth GN], SI [auth A1], SIA [auth H1], SJ [auth A1], SJA [auth H1], SK [auth A1], SKA [auth H1], SL [auth A1], SLA [auth H1], SM [auth A1], SMA [auth H1], SN [auth A1], SNA [auth H1], SO [auth BW], SP [auth D1], SQ [auth D1], SR [auth D1], SS [auth D1], ST [auth D1], SU [auth D1], SV [auth D1], SW [auth D1], SX [auth D1], SZ [auth EW], TAA [auth F1], TBA [auth F1], TCA [auth F1], TDA [auth F1], TEA [auth F1], TFA [auth F1], TG [auth A1], TGA [auth F1], TH [auth A1], THA [auth GO], TI [auth A1], TIA [auth H1], TJ [auth A1], TJA [auth H1], TK [auth A1], TKA [auth H1], TL [auth A1], TLA [auth H1], TM [auth A1], TMA [auth H1], TN [auth A1], TNA [auth H1], TP [auth D1], TQ [auth D1], TR [auth D1], TS [auth D1], TT [auth D1], TU [auth D1], TV [auth D1], TW [auth D1], TX [auth D1], TY [auth DJ], UAA [auth F1], UBA [auth F1], UCA [auth F1], UDA [auth F1], UEA [auth F1], UFA [auth F1], UG [auth A1], UGA [auth F1], UH [auth A1], UHA [auth GP], UI [auth A1], UIA [auth H1], UJ [auth A1], UJA [auth H1], UK [auth A1], UKA [auth H1], UL [auth A1], ULA [auth H1], UM [auth A1], UMA [auth H1], UNA [auth H1], UO [auth C2], UP [auth D1], UQ [auth D1], UR [auth D1], US [auth D1], UT [auth D1], UU [auth D1], UV [auth D1], UW [auth D1], UX [auth D1], UY [auth DK], UZ [auth F1], VAA [auth F1], VBA [auth F1], VCA [auth F1], VDA [auth F1], VEA [auth F1], VFA [auth F1], VG [auth A1], VGA [auth F1], VH [auth A1], VHA [auth GP], VI [auth A1], VIA [auth H1], VJ [auth A1], VJA [auth H1], VK [auth A1], VKA [auth H1], VL [auth A1], VLA [auth H1], VM [auth A1], VMA [auth H1], VN [auth AA], VNA [auth H1], VO [auth C2], VP [auth D1], VQ [auth D1], VR [auth D1], VS [auth D1], VT [auth D1], VU [auth D1], VV [auth D1], VW [auth D1], VX [auth D1], VZ [auth F1], WAA [auth F1], WBA [auth F1], WCA [auth F1], WDA [auth F1], WEA [auth F1], WFA [auth F1], WG [auth A1], WGA [auth FA], WH [auth A1], WHA [auth GQ], WI [auth A1], WIA [auth H1], WJ [auth A1], WJA [auth H1], WK [auth A1], WKA [auth H1], WL [auth A1], WLA [auth H1], WM [auth A1], WMA [auth H1], WN [auth AA], WNA [auth H1], WO [auth C2], WP [auth D1], WQ [auth D1], WR [auth D1], WS [auth D1], WT [auth D1], WU [auth D1], WV [auth D1], WW [auth D1], WX [auth D1], WZ [auth F1], XAA [auth F1], XBA [auth F1], XCA [auth F1], XDA [auth F1], XEA [auth F1], XFA [auth F1], XG [auth A1], XGA [auth FA], XH [auth A1], XHA [auth GW], XI [auth A1], XIA [auth H1], XJ [auth A1], XJA [auth H1], XK [auth A1], XKA [auth H1], XL [auth A1], XLA [auth H1], XM [auth A1], XMA [auth H1], XNA [auth H1], XO [auth C2], XP [auth D1], XQ [auth D1], XR [auth D1], XS [auth D1], XT [auth D1], XU [auth D1], XV [auth D1], XW [auth D1], XX [auth D1], XY [auth DQ], XZ [auth F1], YAA [auth F1], YBA [auth F1], YCA [auth F1], YDA [auth F1], YEA [auth F1], YFA [auth F1], YG [auth A1], YH [auth A1], YI [auth A1], YIA [auth H1], YJ [auth A1], YJA [auth H1], YK [auth A1], YKA [auth H1], YL [auth A1], YLA [auth H1], YM [auth A1], YMA [auth H1], YO [auth C2], YP [auth D1], YQ [auth D1], YR [auth D1], YS [auth D1], YT [auth D1], YU [auth D1], YV [auth D1], YW [auth D1], YX [auth D1], YY [auth E2], YZ [auth F1], ZAA [auth F1], ZBA [auth F1], ZCA [auth F1], ZDA [auth F1], ZEA [auth F1], ZFA [auth F1], ZG [auth A1], ZH [auth A1], ZHA [auth H1], ZI [auth A1], ZIA [auth H1], ZJ [auth A1], ZJA [auth H1], ZK [auth A1], ZKA [auth H1], ZL [auth A1], ZLA [auth H1], ZM [auth A1], ZMA [auth H1], ZN [auth AK], ZO [auth C2], ZP [auth D1], ZQ [auth D1], ZR [auth D1], ZS [auth D1], ZT [auth D1], ZU [auth D1], ZV [auth D1], ZW [auth D1], ZX [auth D1], ZY [auth E2], ZZ [auth F1]
MAGNESIUM ION
Mg
JLVVSXFLKOJNIY-UHFFFAOYSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.52 Å
  • R-Value Free: 0.244 
  • R-Value Work: 0.216 
  • R-Value Observed: 0.216 
  • Space Group: P 1 21 1
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 320.19α = 90
b = 289.25β = 91.22
c = 535.04γ = 90
Software Package:
Software NamePurpose
PHASERmodel building
PHENIXrefinement
XDSdata reduction
XSCALEdata scaling
PHASERphasing

Structure Validation

View Full Validation Report




Entry History 

Deposition Data

Revision History  (Full details and data files)

  • Version 1.0: 2014-07-09
    Type: Initial release
  • Version 1.1: 2014-12-10
    Changes: Other