4PQ9

Crystal Structure of a Beta-1,3-glucanase from Mycobacterium marinum


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.2 Å
  • R-Value Free: 0.143 
  • R-Value Work: 0.118 

wwPDB Validation 3D Report Full Report


This is version 1.1 of the entry. See complete history

Literature

Crystal Structure of a Beta-1,3-glucanase from Mycobacterium marinum

Dranow, D.M.Davies, D.R.Edwards, T.E.Lorimer, D.Seattle Structural Genomics Center for Infectious Disease

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Beta-1,3-glucanase
A, B
257Mycobacterium marinum (strain ATCC BAA-535 / M)Mutation(s): 0 
Find proteins for B2HE62 (Mycobacterium marinum (strain ATCC BAA-535 / M))
Go to UniProtKB:  B2HE62
Small Molecules
Ligands 3 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
EDO
Query on EDO

Download SDF File 
Download CCD File 
A
1,2-ETHANEDIOL
ETHYLENE GLYCOL
C2 H6 O2
LYCAIKOWRPUZTN-UHFFFAOYSA-N
 Ligand Interaction
MG
Query on MG

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Download CCD File 
A, B
MAGNESIUM ION
Mg
JLVVSXFLKOJNIY-UHFFFAOYSA-N
 Ligand Interaction
BTB
Query on BTB

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Download CCD File 
A, B
2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL
BIS-TRIS BUFFER
C8 H19 N O5
OWMVSZAMULFTJU-UHFFFAOYSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

Unit Cell:
Length (Å)Angle (°)
a = 45.120α = 109.45
b = 46.840β = 95.63
c = 51.840γ = 99.79
Software Package:
Software NamePurpose
PDB_EXTRACTdata extraction
BALBESphasing
XSCALEdata scaling
REFMACrefinement

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2014-03-12
    Type: Initial release
  • Version 1.1: 2017-11-22
    Type: Refinement description