3NEY

Crystal structure of the kinase domain of MPP1/p55


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.26 Å
  • R-Value Free: 0.271 
  • R-Value Work: 0.235 
  • R-Value Observed: 0.236 

wwPDB Validation   3D Report Full Report


This is version 1.3 of the entry. See complete history


Literature

Crystal structure of the kinase domain of MPP1/p55

Shen, Y.Tong, Y.Zhong, N.Guan, X.Tempel, W.MacKenzie, F.Arrowsmith, C.H.Edwards, A.M.Bountra, C.Weigelt, J.Bochkarev, A.Park, H.

To be published.

Macromolecules
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 1
MoleculeChainsSequence LengthOrganismDetailsImage
55 kDa erythrocyte membrane proteinA, B, C, D, F [auth E], E [auth F]197Homo sapiensMutation(s): 0 
Gene Names: MPP1DXS552EEMP55
UniProt & NIH Common Fund Data Resources
Find proteins for Q00013 (Homo sapiens)
Explore Q00013 
Go to UniProtKB:  Q00013
PHAROS:  Q00013
Protein Feature View
Expand
  • Reference Sequence
Small Molecules
Ligands 2 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
SO4
Query on SO4

Download Ideal Coordinates CCD File 
AA [auth C] , G [auth A] , GA [auth D] , H [auth A] , HA [auth D] , NA [auth F] , P [auth B] , Q [auth B] , 
AA [auth C],  G [auth A],  GA [auth D],  H [auth A],  HA [auth D],  NA [auth F],  P [auth B],  Q [auth B],  R [auth B],  S [auth B],  SA [auth E],  Z [auth C]
SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
 Ligand Interaction
UNX
Query on UNX

Download Ideal Coordinates CCD File 
BA [auth C] , CA [auth C] , DA [auth C] , EA [auth C] , FA [auth C] , I [auth A] , IA [auth D] , J [auth A] , 
BA [auth C],  CA [auth C],  DA [auth C],  EA [auth C],  FA [auth C],  I [auth A],  IA [auth D],  J [auth A],  JA [auth D],  K [auth A],  KA [auth D],  L [auth A],  LA [auth D],  M [auth A],  MA [auth D],  N [auth A],  O [auth A],  OA [auth F],  PA [auth F],  QA [auth F],  RA [auth F],  T [auth B],  TA [auth E],  U [auth B],  UA [auth E],  V [auth B],  VA [auth E],  W [auth B],  WA [auth E],  X [auth B],  Y [auth B]
UNKNOWN ATOM OR ION
X
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.26 Å
  • R-Value Free: 0.271 
  • R-Value Work: 0.235 
  • R-Value Observed: 0.236 
  • Space Group: P 21 21 21
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 72.088α = 90
b = 131.562β = 90
c = 237.19γ = 90
Software Package:
Software NamePurpose
DENZOdata reduction
SCALEPACKdata scaling
MOLREPphasing
REFMACrefinement
PDB_EXTRACTdata extraction
HKL-2000data reduction
HKL-2000data scaling

Structure Validation

View Full Validation Report



Entry History 

Deposition Data

Revision History  (Full details and data files)

  • Version 1.0: 2010-08-04
    Type: Initial release
  • Version 1.1: 2011-07-13
    Changes: Version format compliance
  • Version 1.2: 2014-11-12
    Changes: Data collection
  • Version 1.3: 2017-11-08
    Changes: Refinement description