3M0W

Structure of S100A4 with PCP


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.80 Å
  • R-Value Free: 0.302 
  • R-Value Work: 0.252 
  • R-Value Observed: 0.254 

wwPDB Validation 3D Report Full Report


This is version 1.2 of the entry. See complete history


Literature

Structure of S100A4 with PCP

Ramagopal, U.A.Dulyaninova, N.G.Almo, S.C.Bresnick, A.R.

To be published.

Macromolecules
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 1
MoleculeChainsSequence LengthOrganismDetailsImage
Protein S100-A4A, B, C, D, E, F, G, H, I, J100Homo sapiensMutation(s): 0 
Gene Names: CAPLMTS1S100A4
Find proteins for P26447 (Homo sapiens)
Explore P26447 
Go to UniProtKB:  P26447
NIH Common Fund Data Resources
PHAROS  P26447
Protein Feature View
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  • Reference Sequence
Small Molecules
Ligands 3 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
P77
Query on P77

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A, B, C, D, E, F, G, H, I, J
2-chloro-10-[3-(4-methylpiperazin-1-yl)propyl]-10H-phenothiazine
C20 H24 Cl N3 S
WIKYUJGCLQQFNW-UHFFFAOYSA-N
 Ligand Interaction
DIO
Query on DIO

Download CCD File 
A, J
1,4-DIETHYLENE DIOXIDE
C4 H8 O2
RYHBNJHYFVUHQT-UHFFFAOYSA-N
 Ligand Interaction
CA
Query on CA

Download CCD File 
A, B, C, D, E, F, G, H, I, J
CALCIUM ION
Ca
BHPQYMZQTOCNFJ-UHFFFAOYSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.80 Å
  • R-Value Free: 0.302 
  • R-Value Work: 0.252 
  • R-Value Observed: 0.254 
  • Space Group: P 1 21 1
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 54.577α = 90
b = 102.275β = 92.6
c = 117.37γ = 90
Software Package:
Software NamePurpose
DENZOdata reduction
SCALEPACKdata scaling
REFMACrefinement
PDB_EXTRACTdata extraction
CBASSdata collection
HKL-2000data reduction
MOLREPphasing

Structure Validation

View Full Validation Report



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2010-05-12
    Type: Initial release
  • Version 1.1: 2011-07-13
    Changes: Advisory, Version format compliance
  • Version 1.2: 2017-11-08
    Changes: Refinement description