3D63

Crystal structure of inorganic pyrophosphatase from Burkholderia pseudomallei


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.3 Å
  • R-Value Free: 0.300 
  • R-Value Work: 0.231 

wwPDB Validation 3D Report Full Report


This is version 1.2 of the entry. See complete history

Literature

Combining functional and structural genomics to sample the essential Burkholderia structome.

Baugh, L.Gallagher, L.A.Patrapuvich, R.Clifton, M.C.Gardberg, A.S.Edwards, T.E.Armour, B.Begley, D.W.Dieterich, S.H.Dranow, D.M.Abendroth, J.Fairman, J.W.Fox, D.Staker, B.L.Phan, I.Gillespie, A.Choi, R.Nakazawa-Hewitt, S.Nguyen, M.T.Napuli, A.Barrett, L.Buchko, G.W.Stacy, R.Myler, P.J.Stewart, L.J.Manoil, C.Van Voorhis, W.C.

(2013) Plos One 8: e53851-e53851


Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Inorganic pyrophosphatase
A, B, C
196Burkholderia pseudomallei (strain 1710b)Mutation(s): 0 
Gene Names: ppa
EC: 3.6.1.1
Find proteins for Q3JUV5 (Burkholderia pseudomallei (strain 1710b))
Go to UniProtKB:  Q3JUV5
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.3 Å
  • R-Value Free: 0.300 
  • R-Value Work: 0.231 
  • Space Group: P 21 21 2
Unit Cell:
Length (Å)Angle (°)
a = 83.886α = 90.00
b = 122.019β = 90.00
c = 71.775γ = 90.00
Software Package:
Software NamePurpose
ADSCdata collection
MOSFLMdata reduction
PDB_EXTRACTdata extraction
PHASERphasing
SCALAdata scaling
REFMACrefinement

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2008-07-08
    Type: Initial release
  • Version 1.1: 2011-07-13
    Type: Source and taxonomy, Version format compliance
  • Version 1.2: 2013-10-30
    Type: Database references