6EHZ

NMR solution structure of murine CXCL12 gamma isoform

PDB DOI: https://doi.org/10.2210/pdb6EHZ/pdb
BMRB: 34176

Classification: CYTOKINE
Organism(s): Mus musculus
Expression System: Escherichia coli BL21(DE3)
Mutation(s): No

Deposited: 2017-09-15 Released: 2018-10-10
Deposition Author(s): Laguri, C., Lortat-Jacob, H., SImorre, J.P.

Experimental Data Snapshot

Method: SOLUTION NMR
Conformers Calculated: 20
Conformers Submitted: 20
Selection Criteria: all calculated structures submitted

wwPDB Validation 3D Report Full Report

This is version 1.3 of the entry. See complete history.

Literature

Deciphering the structural attributes of protein-heparan sulfate interactions using chemo-enzymatic approaches and NMR spectroscopy

Prechoux, A., Simorre, J.P., Lortat-Jacob, H., Laguri, C.

(2021) Glycobiology

DOI: https://doi.org/10.1093/glycob/cwab012

Macromolecule Content

Total Structure Weight: 11.61 kDa
Atom Count: 813
Modelled Residue Count: 98
Deposited Residue Count: 98
Unique protein chains: 1

Macromolecules

Find similar proteins by:

(by identity cutoff) | 3D Structure

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Stromal cell-derived factor 1	A	98	Mus musculus	Mutation(s): 0 Gene Names: Cxcl12
UniProt & NIH Common Fund Data Resources
Find proteins for H7BX38 (Mus musculus) Explore H7BX38 Go to UniProtKB: H7BX38
IMPC: MGI:103556
Entity Groups
Sequence Clusters	30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt Group	H7BX38
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: SOLUTION NMR
Conformers Calculated: 20
Conformers Submitted: 20
Selection Criteria: all calculated structures submitted

Structure Validation

View Full Validation Report

Entry History

Deposition Data

Released Date: 2018-10-10

Deposition Author(s):

Lortat-Jacob, H.

Revision History (Full details and data files)

Version 1.0: 2018-10-10
Type: Initial release
Version 1.1: 2019-05-08
Changes: Data collection, Structure summary
Version 1.2: 2021-03-17
Changes: Database references
Version 1.3: 2023-06-14
Changes: Database references, Other

RCSB PDB Core Operations are funded by the National Science Foundation (DBI-1832184), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.