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NMR solution structure of murine CXCL12 gamma isoform
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 3D 1H-15N NOESY 1 mM [U-99% 13C; U-99% 15N] CXCL12 gamma isoform 90% H2O/10% D2O 20 mM 5.7 1 atm 303 Varian 600 Direct Drive 600 2 3D 1H-13C NOESY 1 mM [U-99% 13C; U-99% 15N] CXCL12 gamma isoform 90% H2O/10% D2O 20 mM 5.7 1 atm 303 Varian 600 Direct Drive 600 3 3D HCCH-TOCSY 1 mM [U-99% 13C; U-99% 15N] CXCL12 gamma isoform 90% H2O/10% D2O 20 mM 5.7 1 atm 303 Varian 600 Direct Drive 600 4 3D H(CCO)NH 1 mM [U-99% 13C; U-99% 15N] CXCL12 gamma isoform 90% H2O/10% D2O 20 mM 5.7 1 atm 303 Varian 600 Direct Drive 600 5 3D 1H-13C NOESY aromatic 1 mM [U-99% 13C; U-99% 15N] CXCL12 gamma isoform 90% H2O/10% D2O 20 mM 5.7 1 atm 303 Varian 600 Direct Drive 600 6 3D 1H-13C NOESY methyls 1 mM [U-99% 13C; U-99% 15N] CXCL12 gamma isoform 90% H2O/10% D2O 20 mM 5.7 1 atm 303 Varian 600 Direct Drive 600
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Varian 600 Direct Drive 600
NMR Refinement Method Details Software simulated annealing ARIA
NMR Ensemble Information Conformer Selection Criteria all calculated structures submitted Conformers Calculated Total Number 20 Conformers Submitted Total Number 20 Representative Model 1 (lowest energy)
Computation: NMR Software # Classification Version Software Name Author 1 refinement CNS Brunger A. T. et.al. 2 structure calculation ARIA Linge, O'Donoghue and Nilges 3 chemical shift assignment CcpNmr Analysis CCPN 4 peak picking CYANA Guntert, Mumenthaler and Wuthrich 5 processing NMRPipe Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax