5WDU
NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose
NAG is a Ligand Of Interest in 5WDU designated by the RCSB
Best-fitted instance in this entry | |
Other instances in this entry |
Best-fitted instance in this entry | |
Best-fitted PDB instances with same target (top 5) |
Best-fitted instance in this entry | |
Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
---|---|---|---|---|---|---|---|---|---|---|---|---|
5WDU_NAG_G_650 | 36% | 75% | 0.223 | 0.915 | 0.29 | 0.66 | - | 1 | 0 | 0 | 100% | 0.9333 |
5WDU_NAG_F_650 | 17% | 73% | 0.321 | 0.9 | 0.32 | 0.7 | - | 1 | 0 | 0 | 100% | 0.9333 |
5WDU_NAG_Q_606 | 13% | 75% | 0.286 | 0.825 | 0.41 | 0.55 | - | - | 0 | 0 | 100% | 0.9333 |
5WDU_NAG_Q_650 | 8% | 82% | 0.435 | 0.907 | 0.25 | 0.54 | - | - | 0 | 0 | 100% | 0.9333 |
5WDU_NAG_G_606 | 5% | 74% | 0.267 | 0.684 | 0.44 | 0.54 | - | - | 0 | 0 | 100% | 0.9333 |
5WDU_NAG_G_633 | 4% | 90% | 0.366 | 0.731 | 0.24 | 0.38 | - | - | 0 | 0 | 100% | 0.9333 |
5WDU_NAG_G_652 | 3% | 92% | 0.433 | 0.775 | 0.18 | 0.33 | - | - | 0 | 0 | 100% | 0.9333 |
5WDU_NAG_A_702 | 3% | 68% | 0.413 | 0.737 | 0.66 | 0.54 | 1 | - | 0 | 0 | 100% | 0.9333 |
5WDU_NAG_A_701 | 3% | 68% | 0.563 | 0.891 | 0.66 | 0.57 | 1 | - | 0 | 0 | 100% | 0.9333 |
5WDU_NAG_F_653 | 2% | 63% | 0.498 | 0.805 | 0.82 | 0.58 | 1 | - | 0 | 0 | 100% | 0.9333 |
5WDU_NAG_Q_653 | 2% | 53% | 0.464 | 0.755 | 1.1 | 0.74 | 1 | 1 | 0 | 0 | 100% | 0.9333 |
5WDU_NAG_R_702 | 2% | 64% | 0.522 | 0.796 | 0.77 | 0.6 | 1 | - | 0 | 0 | 100% | 0.9333 |
5WDU_NAG_F_633 | 2% | 90% | 0.482 | 0.752 | 0.22 | 0.38 | - | - | 0 | 0 | 100% | 0.9333 |
5WDU_NAG_F_606 | 2% | 75% | 0.425 | 0.683 | 0.42 | 0.54 | - | - | 0 | 0 | 100% | 0.9333 |
5WDU_NAG_G_615 | 2% | 53% | 0.435 | 0.694 | 0.94 | 0.88 | 2 | 1 | 0 | 0 | 100% | 0.9333 |
5WDU_NAG_A_703 | 1% | 61% | 0.564 | 0.786 | 0.62 | 0.83 | - | - | 0 | 0 | 100% | 0.9333 |
5WDU_NAG_Q_633 | 1% | 90% | 0.46 | 0.672 | 0.21 | 0.4 | - | - | 0 | 0 | 100% | 0.9333 |
5WDU_NAG_J_703 | 1% | 60% | 0.477 | 0.663 | 0.69 | 0.83 | 1 | - | 0 | 0 | 100% | 0.9333 |
5WDU_NAG_F_652 | 1% | 92% | 0.49 | 0.665 | 0.19 | 0.35 | - | - | 0 | 0 | 100% | 0.9333 |
5WDU_NAG_F_649 | 1% | 14% | 0.525 | 0.681 | 1.67 | 2.38 | 3 | 8 | 0 | 0 | 100% | 0.9333 |
5WDU_NAG_G_653 | 1% | 75% | 0.463 | 0.612 | 0.47 | 0.49 | - | - | 0 | 0 | 100% | 0.9333 |
5WDU_NAG_G_651 | 1% | 80% | 0.54 | 0.657 | 0.34 | 0.5 | - | - | 0 | 0 | 100% | 0.9333 |
5WDU_NAG_J_702 | 1% | 61% | 0.638 | 0.742 | 0.91 | 0.57 | 1 | - | 0 | 0 | 100% | 0.9333 |
5WDU_NAG_R_703 | 1% | 61% | 0.536 | 0.626 | 0.65 | 0.81 | - | - | 0 | 0 | 100% | 0.9333 |
5WDU_NAG_J_701 | 1% | 67% | 0.639 | 0.71 | 0.65 | 0.6 | 1 | - | 0 | 0 | 100% | 0.9333 |
5WDU_NAG_Q_652 | 0% | 92% | 0.582 | 0.602 | 0.18 | 0.35 | - | - | 0 | 0 | 100% | 0.9333 |
5WDU_NAG_F_651 | 0% | 91% | 0.601 | 0.578 | 0.22 | 0.36 | - | - | 0 | 0 | 100% | 0.9333 |
5WDU_NAG_R_701 | 0% | 65% | 0.623 | 0.566 | 0.79 | 0.54 | 1 | - | 0 | 0 | 100% | 0.9333 |
5WDU_NAG_F_615 | 0% | 89% | 0.645 | 0.491 | 0.17 | 0.47 | - | - | 0 | 0 | 100% | 0.9333 |
5WDU_NAG_Q_651 | 0% | 13% | 0.822 | 0.594 | 2.08 | 2.09 | 1 | 6 | 0 | 0 | 100% | 0.9333 |
5WDU_NAG_Q_649 | 0% | 72% | 0.762 | 0.478 | 0.34 | 0.73 | - | 1 | 0 | 0 | 100% | 0.9333 |
5WDU_NAG_Q_615 | 0% | 88% | 0.765 | 0.463 | 0.19 | 0.47 | - | - | 0 | 0 | 100% | 0.9333 |
5WDU_NAG_G_649 | 0% | 13% | 0.715 | 0.363 | 1.79 | 2.32 | 2 | 8 | 0 | 0 | 100% | 0.9333 |
6MTJ_NAG_G_634 | 79% | 76% | 0.101 | 0.946 | 0.31 | 0.61 | - | 1 | 0 | 0 | 100% | 0.9333 |
5U7M_NAG_G_656 | 77% | 90% | 0.092 | 0.932 | 0.21 | 0.4 | - | - | 0 | 0 | 100% | 0.9333 |
6MU7_NAG_G_611 | 75% | 75% | 0.116 | 0.951 | 0.47 | 0.48 | - | - | 0 | 0 | 100% | 0.9333 |
6MTN_NAG_G_634 | 75% | 74% | 0.12 | 0.955 | 0.33 | 0.65 | - | 1 | 0 | 0 | 100% | 0.9333 |
6MU8_NAG_G_634 | 68% | 80% | 0.152 | 0.964 | 0.23 | 0.6 | - | 1 | 0 | 0 | 100% | 0.9333 |
1OC7_NAG_A_500 | 100% | 60% | 0.04 | 0.991 | 0.61 | 0.9 | - | 1 | 0 | 0 | 100% | 0.9333 |
1OC6_NAG_A_500 | 100% | 67% | 0.041 | 0.988 | 0.46 | 0.8 | - | 1 | 0 | 0 | 100% | 0.9333 |
1UWC_NAG_A_262 | 100% | 54% | 0.046 | 0.99 | 0.81 | 0.95 | - | - | 0 | 0 | 100% | 0.9333 |
6ZE6_NAG_B_703 | 99% | 52% | 0.044 | 0.984 | 0.78 | 1.07 | - | 2 | 0 | 0 | 100% | 0.8667 |
6ZE2_NAG_B_704 | 99% | 56% | 0.042 | 0.979 | 0.73 | 0.95 | - | 1 | 0 | 0 | 100% | 0.9333 |