5WDU | pdb_00005wdu


NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose

NAG is a Ligand Of Interest in 5WDU designated by the RCSB
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Best-fitted instance in this entry
Other instances in this entry
Best-fitted instance in this entry
Best-fitted PDB instances with same target (top 5)
Best-fitted instance in this entry
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
5WDU_NAG_G_650 34% 72% 0.223 0.9150.29 0.66 - 100100%1
5WDU_NAG_F_650 15% 69% 0.321 0.90.32 0.7 - 100100%1
5WDU_NAG_Q_606 11% 72% 0.286 0.8250.41 0.55 - -00100%1
5WDU_NAG_Q_650 6% 79% 0.435 0.9070.25 0.54 - -00100%1
5WDU_NAG_G_606 5% 71% 0.267 0.6840.44 0.54 - -00100%1
5WDU_NAG_G_633 3% 87% 0.366 0.7310.24 0.38 - -00100%1
5WDU_NAG_G_652 2% 91% 0.433 0.7750.18 0.33 - -00100%1
5WDU_NAG_A_702 2% 65% 0.413 0.7370.66 0.54 1 -00100%1
5WDU_NAG_A_701 2% 64% 0.563 0.8910.66 0.57 1 -00100%1
5WDU_NAG_F_653 2% 60% 0.498 0.8050.82 0.58 1 -00100%1
5WDU_NAG_Q_653 2% 50% 0.464 0.7551.1 0.74 1 100100%1
5WDU_NAG_R_702 1% 61% 0.522 0.7960.77 0.6 1 -00100%1
5WDU_NAG_F_633 1% 88% 0.482 0.7520.22 0.38 - -00100%1
5WDU_NAG_F_606 1% 72% 0.425 0.6830.42 0.54 - -00100%1
5WDU_NAG_G_615 1% 50% 0.435 0.6940.94 0.88 2 100100%1
5WDU_NAG_A_703 1% 58% 0.564 0.7860.62 0.83 - -00100%1
5WDU_NAG_Q_633 1% 88% 0.46 0.6720.21 0.4 - -00100%1
5WDU_NAG_J_703 1% 57% 0.477 0.6630.69 0.83 1 -00100%1
5WDU_NAG_F_652 1% 90% 0.49 0.6650.19 0.35 - -00100%1
5WDU_NAG_F_649 1% 11% 0.525 0.6811.67 2.38 3 800100%1
5WDU_NAG_G_653 1% 72% 0.463 0.6120.47 0.49 - -00100%1
5WDU_NAG_G_651 1% 76% 0.54 0.6570.34 0.5 - -00100%1
5WDU_NAG_J_702 0% 58% 0.638 0.7420.91 0.57 1 -00100%1
5WDU_NAG_R_703 0% 58% 0.536 0.6260.65 0.81 - -00100%1
5WDU_NAG_J_701 0% 64% 0.639 0.710.65 0.6 1 -00100%1
5WDU_NAG_Q_652 0% 90% 0.582 0.6020.18 0.35 - -00100%1
5WDU_NAG_F_651 0% 89% 0.601 0.5780.22 0.36 - -00100%1
5WDU_NAG_R_701 0% 62% 0.623 0.566 0.79 0.54 1 -00100%1
5WDU_NAG_F_615 0% 86% 0.645 0.491 0.17 0.47 - -00100%1
5WDU_NAG_Q_651 0% 10% 0.822 0.5942.08 2.09 1 600100%1
5WDU_NAG_Q_649 0% 68% 0.762 0.478 0.34 0.73 - 100100%1
5WDU_NAG_Q_615 0% 85% 0.765 0.463 0.19 0.47 - -00100%1
5WDU_NAG_G_649 0% 11% 0.715 0.363 1.79 2.32 2 800100%1
5C7K_NAG_D_702 65% 71% 0.107 0.9110.34 0.63 - 100100%1
5UTF_NAG_B_703 56% 76% 0.151 0.9260.46 0.4 - -10100%1
7UCF_NAG_G_603 44% 40% 0.15 0.8781.06 1.18 2 100100%1
6B0N_NAG_G_1637 37% 58% 0.21 0.9110.54 0.9 - -00100%1
5UTY_NAG_G_607 30% 68% 0.186 0.8540.53 0.54 - -00100%1
5LDS_NAG_C_1003 100% 65% 0.016 0.9970.55 0.64 - -30100%1
3H0C_NAG_A_796 100% 55% 0.02 0.9950.47 1.12 - 100100%1
5O5D_NAG_B_501 100% 60% 0.02 0.9950.38 0.97 - 100100%1
9OAR_NAG_C_202 100% 52% 0.021 0.9940.68 1.06 - 100100%1
6MUG_NAG_G_629 100% 72% 0.022 0.9940.35 0.58 - -00100%1