U5P: URIDINE-5'-MONOPHOSPHATE

U5P is a Ligand Of Interest in 5MKN designated by the RCSB


Best-fitted instance in this entry
Other instances in this entry
Best-fitted instance in this entry
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
5MKN_U5P_P_101 36% 39% 0.151 0.8791.22 1.21 2 10081%0.6962
5MKN_U5P_a_101 19% 39% 0.192 0.8161.12 1.34 2 10081%0.7529
5MKN_U5P_F_102 18% 56% 0.245 0.8370.86 0.84 1 -0095%0.6476
5MKN_U5P_A_101 17% 42% 0.217 0.8261.07 1.22 1 10081%0.7286
5MKN_U5P_I_101 16% 42% 0.234 0.8351.07 1.21 1 10081%0.6881
5MKN_U5P_D_101 16% 42% 0.237 0.8381.15 1.17 1 10081%0.6314
5MKN_U5P_U_102 14% 50% 0.251 0.8121.06 0.87 1 -0095%0.7048
5MKN_U5P_C_101 10% 40% 0.246 0.7891.19 1.22 2 10081%0.6476
5MKN_U5P_b_101 9% 43% 0.26 0.7851.07 1.18 1 10081%0.6314
5MKN_U5P_N_101 9% 41% 0.275 0.7951.11 1.22 1 10081%0.6476
5MKN_U5P_F_101 8% 43% 0.274 0.7791.13 1.14 2 10081%0.599
5MKN_U5P_L_101 7% 42% 0.274 0.7661.08 1.2 2 10081%0.6476
5MKN_U5P_Q_101 6% 41% 0.238 0.7151.12 1.22 1 10081%0.6395
5MKN_U5P_Z_101 6% 38% 0.242 0.7121.22 1.3 3 10081%0.6719
5MKN_U5P_R_101 5% 40% 0.271 0.7241.22 1.19 2 10081%0.68
5MKN_U5P_K_101 5% 42% 0.292 0.7331.1 1.21 2 10081%0.7043
5MKN_U5P_V_101 5% 40% 0.282 0.7171.17 1.24 1 10081%0.6557
5MKN_U5P_E_101 4% 43% 0.288 0.7121.13 1.13 1 10081%0.6557
5MKN_U5P_W_101 4% 40% 0.312 0.731.1 1.31 1 10081%0.6071
5MKN_U5P_B_101 4% 44% 0.286 0.6921.1 1.12 1 10081%0.6233
5MKN_U5P_T_101 4% 42% 0.28 0.6831.1 1.19 1 10081%0.6476
5MKN_U5P_G_101 3% 43% 0.279 0.6441.18 1.08 1 10081%0.6395
5MKN_U5P_U_101 3% 42% 0.303 0.6651.14 1.15 1 10081%0.68
5MKN_U5P_d_101 2% 39% 0.324 0.651.1 1.34 2 10081%0.7043
5MKN_U5P_O_101 2% 43% 0.329 0.6451.14 1.11 2 10081%0.6152
5MKN_U5P_M_101 2% 44% 0.335 0.6381.16 1.06 2 10081%0.6233
5MKN_U5P_J_101 2% 44% 0.32 0.611.07 1.14 1 10081%0.6476
5MKN_U5P_H_101 1% 43% 0.353 0.6161.14 1.09 2 10081%0.6314
5MKN_U5P_Y_101 1% 42% 0.343 0.6041.13 1.15 1 10081%0.591
5MKN_U5P_X_101 1% 42% 0.385 0.507 1.11 1.21 1 10081%0.599
6YWU_U5P_A_501 100% 41% 0.036 0.9941.2 1.13 2 100100%1
2E6Y_U5P_B_302 100% 50% 0.04 0.9931.11 0.85 1 110100%1
6ZWY_U5P_A_501 100% 45% 0.048 0.9940.99 1.17 1 100100%1
3EWY_U5P_A_481 99% 24% 0.05 0.9861.81 1.47 4 200100%1
2V30_U5P_A_1480 99% 35% 0.06 0.9871.12 1.52 3 710100%1