5MKN
U5P: URIDINE-5'-MONOPHOSPHATE
U5P is a Ligand Of Interest in 5MKN designated by the RCSB
Best-fitted instance in this entry | |
Other instances in this entry |
Best-fitted instance in this entry | |
Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
---|---|---|---|---|---|---|---|---|---|---|---|---|
5MKN_U5P_P_101 | 36% | 39% | 0.151 | 0.879 | 1.22 | 1.21 | 2 | 1 | 0 | 0 | 81% | 0.6962 |
5MKN_U5P_a_101 | 19% | 39% | 0.192 | 0.816 | 1.12 | 1.34 | 2 | 1 | 0 | 0 | 81% | 0.7529 |
5MKN_U5P_F_102 | 18% | 56% | 0.245 | 0.837 | 0.86 | 0.84 | 1 | - | 0 | 0 | 95% | 0.6476 |
5MKN_U5P_A_101 | 17% | 42% | 0.217 | 0.826 | 1.07 | 1.22 | 1 | 1 | 0 | 0 | 81% | 0.7286 |
5MKN_U5P_I_101 | 16% | 42% | 0.234 | 0.835 | 1.07 | 1.21 | 1 | 1 | 0 | 0 | 81% | 0.6881 |
5MKN_U5P_D_101 | 16% | 42% | 0.237 | 0.838 | 1.15 | 1.17 | 1 | 1 | 0 | 0 | 81% | 0.6314 |
5MKN_U5P_U_102 | 14% | 50% | 0.251 | 0.812 | 1.06 | 0.87 | 1 | - | 0 | 0 | 95% | 0.7048 |
5MKN_U5P_C_101 | 10% | 40% | 0.246 | 0.789 | 1.19 | 1.22 | 2 | 1 | 0 | 0 | 81% | 0.6476 |
5MKN_U5P_b_101 | 9% | 43% | 0.26 | 0.785 | 1.07 | 1.18 | 1 | 1 | 0 | 0 | 81% | 0.6314 |
5MKN_U5P_N_101 | 9% | 41% | 0.275 | 0.795 | 1.11 | 1.22 | 1 | 1 | 0 | 0 | 81% | 0.6476 |
5MKN_U5P_F_101 | 8% | 43% | 0.274 | 0.779 | 1.13 | 1.14 | 2 | 1 | 0 | 0 | 81% | 0.599 |
5MKN_U5P_L_101 | 7% | 42% | 0.274 | 0.766 | 1.08 | 1.2 | 2 | 1 | 0 | 0 | 81% | 0.6476 |
5MKN_U5P_Q_101 | 6% | 41% | 0.238 | 0.715 | 1.12 | 1.22 | 1 | 1 | 0 | 0 | 81% | 0.6395 |
5MKN_U5P_Z_101 | 6% | 38% | 0.242 | 0.712 | 1.22 | 1.3 | 3 | 1 | 0 | 0 | 81% | 0.6719 |
5MKN_U5P_R_101 | 5% | 40% | 0.271 | 0.724 | 1.22 | 1.19 | 2 | 1 | 0 | 0 | 81% | 0.68 |
5MKN_U5P_K_101 | 5% | 42% | 0.292 | 0.733 | 1.1 | 1.21 | 2 | 1 | 0 | 0 | 81% | 0.7043 |
5MKN_U5P_V_101 | 5% | 40% | 0.282 | 0.717 | 1.17 | 1.24 | 1 | 1 | 0 | 0 | 81% | 0.6557 |
5MKN_U5P_E_101 | 4% | 43% | 0.288 | 0.712 | 1.13 | 1.13 | 1 | 1 | 0 | 0 | 81% | 0.6557 |
5MKN_U5P_W_101 | 4% | 40% | 0.312 | 0.73 | 1.1 | 1.31 | 1 | 1 | 0 | 0 | 81% | 0.6071 |
5MKN_U5P_B_101 | 4% | 44% | 0.286 | 0.692 | 1.1 | 1.12 | 1 | 1 | 0 | 0 | 81% | 0.6233 |
5MKN_U5P_T_101 | 4% | 42% | 0.28 | 0.683 | 1.1 | 1.19 | 1 | 1 | 0 | 0 | 81% | 0.6476 |
5MKN_U5P_G_101 | 3% | 43% | 0.279 | 0.644 | 1.18 | 1.08 | 1 | 1 | 0 | 0 | 81% | 0.6395 |
5MKN_U5P_U_101 | 3% | 42% | 0.303 | 0.665 | 1.14 | 1.15 | 1 | 1 | 0 | 0 | 81% | 0.68 |
5MKN_U5P_d_101 | 2% | 39% | 0.324 | 0.65 | 1.1 | 1.34 | 2 | 1 | 0 | 0 | 81% | 0.7043 |
5MKN_U5P_O_101 | 2% | 43% | 0.329 | 0.645 | 1.14 | 1.11 | 2 | 1 | 0 | 0 | 81% | 0.6152 |
5MKN_U5P_M_101 | 2% | 44% | 0.335 | 0.638 | 1.16 | 1.06 | 2 | 1 | 0 | 0 | 81% | 0.6233 |
5MKN_U5P_J_101 | 2% | 44% | 0.32 | 0.61 | 1.07 | 1.14 | 1 | 1 | 0 | 0 | 81% | 0.6476 |
5MKN_U5P_H_101 | 1% | 43% | 0.353 | 0.616 | 1.14 | 1.09 | 2 | 1 | 0 | 0 | 81% | 0.6314 |
5MKN_U5P_Y_101 | 1% | 42% | 0.343 | 0.604 | 1.13 | 1.15 | 1 | 1 | 0 | 0 | 81% | 0.591 |
5MKN_U5P_X_101 | 1% | 42% | 0.385 | 0.507 | 1.11 | 1.21 | 1 | 1 | 0 | 0 | 81% | 0.599 |
6YWU_U5P_A_501 | 100% | 41% | 0.036 | 0.994 | 1.2 | 1.13 | 2 | 1 | 0 | 0 | 100% | 1 |
2E6Y_U5P_B_302 | 100% | 50% | 0.04 | 0.993 | 1.11 | 0.85 | 1 | 1 | 1 | 0 | 100% | 1 |
6ZWY_U5P_A_501 | 100% | 45% | 0.048 | 0.994 | 0.99 | 1.17 | 1 | 1 | 0 | 0 | 100% | 1 |
3EWY_U5P_A_481 | 99% | 24% | 0.05 | 0.986 | 1.81 | 1.47 | 4 | 2 | 0 | 0 | 100% | 1 |
2V30_U5P_A_1480 | 99% | 35% | 0.06 | 0.987 | 1.12 | 1.52 | 3 | 7 | 1 | 0 | 100% | 1 |