8H1D

Solid-state NMR Structure of Aquaporin Z in its Native Cellular Membranes


SOLID-STATE NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D NCA29.4 % w/w [U-13C; U-15N] aquaporin Z5 mM Tris-Cl pH 8.01 M8.01 atm298Bruker AVANCE III 800
22D DARR29.4 % w/w [U-13C; U-15N] aquaporin Z5 mM Tris-Cl pH 8.01 M8.01 atm298Bruker AVANCE III 800
33D NCACX29.4 % w/w [U-13C; U-15N] aquaporin Z5 mM Tris-Cl pH 8.01 M8.01 atm298Bruker AVANCE III 800
43D NCOCX29.4 % w/w [U-13C; U-15N] aquaporin Z5 mM Tris-Cl pH 8.01 M8.01 atm298Bruker AVANCE III 800
53D CONCA29.4 % w/w [U-13C; U-15N] aquaporin Z5 mM Tris-Cl pH 8.01 M8.01 atm298Bruker AVANCE III 800
62D 100ms CORD29.4 % w/w [U-13C; U-15N] aquaporin Z5 mM Tris-Cl pH 8.01 M8.01 atm298Bruker AVANCE III 800
82D 500ms CORD29.4 % w/w [U-13C; U-15N] aquaporin Z5 mM Tris-Cl pH 8.01 M8.01 atm298Bruker AVANCE III 800
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerAVANCE III800
NMR Refinement
MethodDetailsSoftware
distance geometryWe calculated 1000 monomer structures using 1007 distance restraints, 214 angle restraints predicted from TALOS+ using assigned 15N and 13C chemical shifts, and 132 intrahelical hydrogen bonds predicted from both the chemical shift index and TALOS+.X-PLOR NIH
NMR Ensemble Information
Conformer Selection Criteriastructures with the lowest energy
Conformers Calculated Total Number1000
Conformers Submitted Total Number10
Representative Model1 (lowest energy)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1chemical shift assignmentNMRFAM-SPARKY2.6T. D. Goddard and D. G. Kneller
2structure calculationX-PLOR NIH2.47Schwieters, Kuszewski, Tjandra and Clore
3collectionTopSpin3.6Bruker Biospin
4processingNMRPipe3.0Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax