5L6R

PrP226* - Solution-state NMR structure of truncated human prion protein

SOLUTION NMR

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NMR Experiment
Experiment	Type	Sample Contents	Solvent	Ionic Strength	pH	Pressure	Temperature (K)	Spectrometer
4	2D 1H-15N HSQC	0.9 mM (13C, 15N)-doubly labeled PrP226*	90% H2O/10% D2O	150 mM	4.9	1 atm	298	Agilent VNMRS 800
15	2D 1H-15N HSQC NH2 only	0.9 mM (13C, 15N)-doubly labeled PrP226*	90% H2O/10% D2O	150 mM	4.9	1 atm	298	Agilent VNMRS 800
10	3D HNCACB	0.9 mM (13C, 15N)-doubly labeled PrP226*	90% H2O/10% D2O	150 mM	4.9	1 atm	298	Agilent VNMRS 800
14	3D HBHA(CO)NH	0.9 mM (13C, 15N)-doubly labeled PrP226*	90% H2O/10% D2O	150 mM	4.9	1 atm	298	Agilent VNMRS 800
12	3D 1H-15N NOESY	0.9 mM (13C, 15N)-doubly labeled PrP226*	90% H2O/10% D2O	150 mM	4.9	1 atm	298	Agilent VNMRS 800
7	3D CBCA(CO)NH	0.9 mM (13C, 15N)-doubly labeled PrP226*	90% H2O/10% D2O	150 mM	4.9	1 atm	298	Agilent VNMRS 800
1	3D HNCO	0.9 mM (13C, 15N)-doubly labeled PrP226*	90% H2O/10% D2O	150 mM	4.9	1 atm	298	Agilent VNMRS 800
2	3D HNCA	0.9 mM (13C, 15N)-doubly labeled PrP226*	90% H2O/10% D2O	150 mM	4.9	1 atm	298	Agilent VNMRS 800
16	3D HN(CO)CA	0.9 mM (13C, 15N)-doubly labeled PrP226*	90% H2O/10% D2O	150 mM	4.9	1 atm	298	Agilent VNMRS 800
5	2D 1H-13C HSQC aliphatic	0.9 mM (13C, 15N)-doubly labeled PrP226*	90% H2O/10% D2O	150 mM	4.9	1 atm	298	Agilent VNMRS 800
8	2D 1H-13C HSQC aromatic	0.9 mM (13C, 15N)-doubly labeled PrP226*	90% H2O/10% D2O	150 mM	4.9	1 atm	298	Agilent VNMRS 800
9	3D 1H-13C NOESY aliphatic	0.9 mM (13C, 15N)-doubly labeled PrP226*	90% H2O/10% D2O	150 mM	4.9	1 atm	298	Agilent VNMRS 800
6	3D 1H-13C NOESY aromatic	0.9 mM (13C, 15N)-doubly labeled PrP226*	90% H2O/10% D2O	150 mM	4.9	1 atm	298	Agilent VNMRS 800
13	3D CCH-TOCSY	0.9 mM (13C, 15N)-doubly labeled PrP226*	90% H2O/10% D2O	150 mM	4.9	1 atm	298	Agilent VNMRS 800
11	3D HCCH-TOCSY	0.9 mM (13C, 15N)-doubly labeled PrP226*	90% H2O/10% D2O	150 mM	4.9	1 atm	298	Agilent VNMRS 800

NMR Spectrometer Information
Spectrometer	Manufacturer	Model	Field Strength
1	Agilent	VNMRS	800

NMR Ensemble Information
Conformer Selection Criteria
Conformers Calculated Total Number
Conformers Submitted Total Number	20

Computation: NMR Software
#	Classification	Version	Software Name	Author
1	chemical shift assignment	CARA		Keller and Wuthrich
5	chemical shift assignment	Sparky		Goddard
2	structure calculation	CYANA		Guntert, Mumenthaler and Wuthrich
3	geometry optimization	TALOS		Cornilescu, Delaglio and Bax
4	refinement	YASARA		Prof. Dr. Gregor Hoegenauer, Prof. Dr. Guenther Koraimann, Prof. Dr. Andreas Kungl, Prof. Dr. Gert Vriend
6	collection	VNMR		Varian
7	processing	NMRPipe		Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax
8	data analysis	UCSF Chimera		Resource for Biocomputing, Visualization, and Informatics