3DCL

Crystal structure of TM1086

X-RAY DIFFRACTION

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Crystallization

Crystalization Experiments
ID	Method	pH	Temperature	Details
1	VAPOR DIFFUSION, HANGING DROP	6.5	293	0.2M K/NA TARTRATE, 2M AMMONIUM SULPHATE,0.1M NA CITRATE PH5.6, VAPOR DIFFUSION - HANGING DROP, TEMPERATURE 293K, pH 6.5, VAPOR DIFFUSION, HANGING DROP

Crystal Properties
Matthews coefficient	Solvent content
2.48	50.48

Crystal Data

Unit Cell
Length ( Å )	Angle ( ˚ )
a = 164.578	α = 90
b = 164.578	β = 90
c = 97.815	γ = 120

Symmetry
Space Group	P 32 2 1

Diffraction

Diffraction Experiment
ID #	Crystal ID	Scattering Type	Data Collection Temperature	Detector	Detector Type	Details	Collection Date	Monochromator	Protocol
1	1	x-ray	100	CCD	ADSC QUANTUM 315	MIRROR	2007-11-02	M	SINGLE WAVELENGTH

Radiation Source
ID #	Source	Type	Wavelength List	Synchrotron Site	Beamline
1	SYNCHROTRON	APS BEAMLINE 19-ID	0.979	APS	19-ID

Data Collection

Overall
ID #	Resolution (High)	Resolution (Low)	Percent Possible (Observed)	R Merge I (Observed)	R Sym I (Observed)	Net I Over Average Sigma (I)	Redundancy	Number Reflections (All)	Number Reflections (Observed)	Observed Criterion Sigma (F)	Observed Criterion Sigma (I)	B (Isotropic) From Wilson Plot
1	2.25	50	99.8	0.101	0.101	29.451	6.6	72494	72494		-3

Highest Resolution Shell
ID #	Resolution (High)	Resolution (Low)	Percent Possible (All)	Percent Possible (Observed)	R Merge I (Observed)	R-Sym I (Observed)	Mean I Over Sigma (Observed)	Redundancy	Number Unique Reflections (All)
1	2.25	2.29	98.6		0.449	0.449	3.7	5.9

Refinement

Statistics
Diffraction ID	Structure Solution Method	Cross Validation method	Resolution (High)	Resolution (Low)	Number Reflections (All)	Number Reflections (Observed)	Number Reflections (R-Free)	Percent Reflections (Observed)	R-Factor (All)	R-Factor (Observed)	R-Work	R-Free	R-Free Selection Details	Mean Isotropic B
X-RAY DIFFRACTION	SAD	THROUGHOUT	2.25	50	71836	71836	2862	99.16	0.166	0.166	0.164	0.212	RANDOM	32.72

Temperature Factor Modeling
Anisotropic B[1][1]	Anisotropic B[1][2]	Anisotropic B[1][3]	Anisotropic B[2][2]	Anisotropic B[2][3]	Anisotropic B[3][3]
-2.22	-1.11		-2.22		3.33

RMS Deviations
Key	Refinement Restraint Deviation
r_dihedral_angle_2_deg	36.48
r_dihedral_angle_4_deg	18.924
r_dihedral_angle_3_deg	13.654
r_dihedral_angle_1_deg	6.695
r_scangle_it	4.156
r_scbond_it	2.774
r_angle_refined_deg	1.568
r_angle_other_deg	1.236
r_mcangle_it	1.181
r_mcbond_it	0.585
r_symmetry_vdw_other	0.258
r_symmetry_vdw_refined	0.237
r_nbd_other	0.21
r_nbd_refined	0.202
r_nbtor_refined	0.167
r_xyhbond_nbd_refined	0.141
r_mcbond_other	0.128
r_symmetry_hbond_refined	0.121
r_chiral_restr	0.089
r_nbtor_other	0.085
r_metal_ion_refined	0.019
r_bond_refined_d	0.017
r_bond_other_d	0.006
r_gen_planes_refined	0.006
r_gen_planes_other	0.002
r_xyhbond_nbd_other
r_metal_ion_other
r_symmetry_hbond_other
r_symmetry_metal_ion_refined
r_symmetry_metal_ion_other
r_rigid_bond_restr
r_sphericity_free
r_sphericity_bonded

Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen Atoms	Number
Protein Atoms	10483
Nucleic Acid Atoms
Solvent Atoms	641
Heterogen Atoms	87

Software

Software
Software Name	Purpose
HKL-3000	phasing
MLPHARE	phasing
DM	model building
SHELXD	phasing
RESOLVE	model building
ARP	model building
Coot	model building
REFMAC	refinement
HKL-3000	data collection
HKL-2000	data reduction
HKL-2000	data scaling
DM	phasing
RESOLVE	phasing
MAIN	refinement