Annotations: 3DCL

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
E	CblD	e3dclE1	A: alpha bundles	X: DEATH domain	H: 40S ribosomal protein S13 N-terminal domain	T: 40S ribosomal protein S13 N-terminal domain	F: CblD	ECOD (develop294)
D	CblD	e3dclD1	A: alpha bundles	X: DEATH domain	H: 40S ribosomal protein S13 N-terminal domain	T: 40S ribosomal protein S13 N-terminal domain	F: CblD	ECOD (develop294)
C	CblD	e3dclC1	A: alpha bundles	X: DEATH domain	H: 40S ribosomal protein S13 N-terminal domain	T: 40S ribosomal protein S13 N-terminal domain	F: CblD	ECOD (develop294)
B	CblD	e3dclB1	A: alpha bundles	X: DEATH domain	H: 40S ribosomal protein S13 N-terminal domain	T: 40S ribosomal protein S13 N-terminal domain	F: CblD	ECOD (develop294)
A	CblD	e3dclA1	A: alpha bundles	X: DEATH domain	H: 40S ribosomal protein S13 N-terminal domain	T: 40S ribosomal protein S13 N-terminal domain	F: CblD	ECOD (develop294)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
E	2.102.30.10	Mainly Beta	3-layer Sandwich	tm1086 (SG structure) fold	tm1086 (SG structure) domain	CATH (4.3.0)
E	2.40.10.170	Mainly Beta	Beta Barrel	Thrombin, subunit H		CATH (4.3.0)
E	4.10.1180.10	Few Secondary Structures	Irregular	tm1086 fold	tm1086 domain	CATH (4.3.0)
D	2.102.30.10	Mainly Beta	3-layer Sandwich	tm1086 (SG structure) fold	tm1086 (SG structure) domain	CATH (4.3.0)
D	2.40.10.170	Mainly Beta	Beta Barrel	Thrombin, subunit H		CATH (4.3.0)
D	4.10.1180.10	Few Secondary Structures	Irregular	tm1086 fold	tm1086 domain	CATH (4.3.0)
C	2.102.30.10	Mainly Beta	3-layer Sandwich	tm1086 (SG structure) fold	tm1086 (SG structure) domain	CATH (4.3.0)
C	2.40.10.170	Mainly Beta	Beta Barrel	Thrombin, subunit H		CATH (4.3.0)
C	4.10.1180.10	Few Secondary Structures	Irregular	tm1086 fold	tm1086 domain	CATH (4.3.0)
B	2.102.30.10	Mainly Beta	3-layer Sandwich	tm1086 (SG structure) fold	tm1086 (SG structure) domain	CATH (4.3.0)
B	2.40.10.170	Mainly Beta	Beta Barrel	Thrombin, subunit H		CATH (4.3.0)
B	4.10.1180.10	Few Secondary Structures	Irregular	tm1086 fold	tm1086 domain	CATH (4.3.0)
A	2.102.30.10	Mainly Beta	3-layer Sandwich	tm1086 (SG structure) fold	tm1086 (SG structure) domain	CATH (4.3.0)
A	2.40.10.170	Mainly Beta	Beta Barrel	Thrombin, subunit H		CATH (4.3.0)
A	4.10.1180.10	Few Secondary Structures	Irregular	tm1086 fold	tm1086 domain	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D, E	PF14505	Domain of unknown function (DUF4438), N-terminal (DUF4438)	Domain of unknown function (DUF4438), N-terminal	This is the N-terminal domain of TM_1086 and related proteins.	Domain
A, B, C, D, E	PF20999	Domain of unknown function (DUF4438), C-terminal (DUF4438_C)	Domain of unknown function (DUF4438), C-terminal	This is the C-terminal domain of TM_1086 which consists of a 3-layer sandwich.	Domain

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D, E	IPR029433	DUF4438, N-terminal	Domain
A, B, C, D, E	IPR044909	TM_1086 superfamily	Homologous Superfamily
A, B, C, D, E	IPR044910	TM_1086, SG structure domain	Homologous Superfamily
A, B, C, D, E	IPR048399	DUF4438, C-terminal	Domain

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.