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Apis mellifera odorant binding protein 5
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 4 298 20-25% PEG1500, MIB pH 3.7-4, VAPOR DIFFUSION, SITTING DROP, temperature 298K
Crystal Properties Matthews coefficient Solvent content 2.11 41.64
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 37.695 α = 90 b = 45.239 β = 90 c = 70.882 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 4 2010-07-27 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ESRF BEAMLINE ID29 ESRF ID29
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.15 38.13 99.4 0.046 17.5 5.8 42573 42573 10.1
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.15 1.21 97.1 0.5 2.4 3.4 6095
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Cut-off Sigma (F) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 1.15 38.13 1 41327 41327 2188 99.3 0.15289 0.15181 0.15 0.17253 0.17 RANDOM 10.071
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.04 -0.26 0.3
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 31.636 r_dihedral_angle_4_deg 17.878 r_dihedral_angle_3_deg 13.622 r_scangle_it 4.488 r_dihedral_angle_1_deg 4.47 r_scbond_it 2.859 r_mcangle_it 1.955 r_angle_refined_deg 1.341 r_mcbond_it 1.121 r_rigid_bond_restr 1.082
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 31.636 r_dihedral_angle_4_deg 17.878 r_dihedral_angle_3_deg 13.622 r_scangle_it 4.488 r_dihedral_angle_1_deg 4.47 r_scbond_it 2.859 r_mcangle_it 1.955 r_angle_refined_deg 1.341 r_mcbond_it 1.121 r_rigid_bond_restr 1.082 r_angle_other_deg 0.91 r_mcbond_other 0.32 r_chiral_restr 0.087 r_bond_refined_d 0.009 r_gen_planes_refined 0.007 r_bond_other_d 0.001 r_gen_planes_other 0.001
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 990 Nucleic Acid Atoms Solvent Atoms 254 Heterogen Atoms 28
Software Software Software Name Purpose ADSC data collection MOLREP phasing REFMAC refinement XDS data reduction SCALA data scaling