2L23

NMR structure of the ACID (ACtivator Interacting Domain) of the human mediator Med25 protein


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D 1H-15N HSQC0.2 MM [U-100% 15N] MED25, 10 MM SODIUM PHOSPHATE, 100 MM SODIUM CHLORIDE, 5 MM DTT100% D2O1206.75AMBIENT293
22D 1H-13C HSQC0.3-0.5 MM [U-95% 13C] MED25, 10 MM SODIUM PHOSPHATE, 100 MM SODIUM CHLORIDE, 5 MM DTT100% D2O1206.75AMBIENT293
33D HNCA0.3-0.5 MM [U-98% 13C U-98% 15N] MED25, 10 MM SODIUM PHOSPHATE, 100 MM SODIUM CHLORIDE, 5 MM DTT, 90% H2O/ 10% D2O90% H2O/10% D2O1206.75AMBIENT293
43D HNCACB0.3-0.5 MM [U-98% 13C U-98% 15N] MED25, 10 MM SODIUM PHOSPHATE, 100 MM SODIUM CHLORIDE, 5 MM DTT, 90% H2O/ 10% D2O90% H2O/10% D2O1206.75AMBIENT293
53D HNCO0.3-0.5 MM [U-98% 13C U-98% 15N] MED25, 10 MM SODIUM PHOSPHATE, 100 MM SODIUM CHLORIDE, 5 MM DTT, 90% H2O/ 10% D2O90% H2O/10% D2O1206.75AMBIENT293
63D CBCA(CO)NH0.3-0.5 MM [U-98% 13C U-98% 15N] MED25, 10 MM SODIUM PHOSPHATE, 100 MM SODIUM CHLORIDE, 5 MM DTT, 90% H2O/ 10% D2O90% H2O/10% D2O1206.75AMBIENT293
73D HNHA0.3-0.5 MM [U-98% 13C U-98% 15N] MED25, 10 MM SODIUM PHOSPHATE, 100 MM SODIUM CHLORIDE, 5 MM DTT, 90% H2O/ 10% D2O90% H2O/10% D2O1206.75AMBIENT293
83D HCCH-TOCSY0.3-0.5 MM [U-95% 13C] MED25, 10 MM SODIUM PHOSPHATE, 100 MM SODIUM CHLORIDE, 5 MM DTT100% D2O1206.75AMBIENT293
93D 1H-15N NOESY0.3-0.5 MM [U-100% 15N] MED25, 10 MM SODIUM PHOSPHATE, 100 MM SODIUM CHLORIDE, 5 MM DTT90% H2O/10% D2O1206.75AMBIENT293
103D 1H- 13CALI NOESY0.3-0.5 MM [U-95% 13C] MED25, 10 MM SODIUM PHOSPHATE, 100 MM SODIUM CHLORIDE, 5 MM DTT100% D2O1206.75AMBIENT293
113D 1H-13CARO NOESY0.3-0.5 MM [U-95% 13C] MED25, 10 MM SODIUM PHOSPHATE, 100 MM SODIUM CHLORIDE, 5 MM DTT100% D2O1206.75AMBIENT293
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerAVANCE III950
2BrukerAVANCE II600
3BrukerAVANCE III800
NMR Refinement
MethodDetailsSoftware
torsion angle dynamicsCYANA
NMR Ensemble Information
Conformer Selection Criteriaall calculated structures submitted
Conformers Calculated Total Number20
Conformers Submitted Total Number20
Representative Model1 (lowest energy)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1refinementCYANA2.1Guntert, Mumenthaler and Wuthrich
2chemical shift assignmentCcpNmr AnalysisCCPN Project
3peak pickingCcpNmr AnalysisCCPN Project