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MONOCLINIC HEN EGG WHITE LYSOZYME IODIDE
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 5LYM
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 8 1% PROTEIN, 200 MMOLAR ACETATE BUFFER, PH 8, 5% SODIUM IODIDE, pH 8.0
Crystal Properties Matthews coefficient Solvent content 1.85 26
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 27.894 α = 90 b = 63.153 β = 90.12 c = 60.227 γ = 90
Symmetry Space Group P 1 21 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 298 IMAGE PLATE RIGAKU 1994-09-10 M
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 ROTATING ANODE RIGAKU RUH2R
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.6 8 63 0.0761 3 22327 1
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Cut-off Sigma (F) Number Reflections (All) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT FREE R 1.6 8 1 44071 4369 63 0.1058 0.1404 0.5315 0.1404 RANDOM
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3]
RMS Deviations Key Refinement Restraint Deviation s_zero_chiral_vol 0.159 s_non_zero_chiral_vol 0.094 s_similar_dist 0.002 s_bond_d s_angle_d s_from_restr_planes s_anti_bump_dis_restr s_rigid_bond_adp_cmpnt s_similar_adp_cmpnt s_approx_iso_adps
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2002 Nucleic Acid Atoms Solvent Atoms 296 Heterogen Atoms 17
Software Software Software Name Purpose MCS data reduction X-PLOR model building X-PLOR refinement MCS data scaling X-PLOR phasing