X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
17.818MG/ML PROTEIN, 10MM CACL2 IN 50 MM HEPES AT PH=7.8 WAS EQUILIBRATED AGAINST 50% AMMONIUM SULFATE IN THE SAME BUFFER.
Crystal Properties
Matthews coefficientSolvent content
2.2238.87

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 42.29α = 90
b = 68.72β = 94.27
c = 50.59γ = 90
Symmetry
Space GroupP 1 21 1

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray300IMAGE PLATEMARRESEARCH1995-06-08M
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONLURE BEAMLINE D41ALURED41A

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Sym I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
11.9518.9598.50.0724.712.9208180.6
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R-Sym I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
1.95283.50.1394.72.08

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodStarting modelResolution (High)Resolution (Low)Cut-off Sigma (F)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTTHROUGHOUTPDB ENTRY 1AXN1.9520120799103998.50.1960.1930.237RANDOM18.8
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
RMS Deviations
KeyRefinement Restraint Deviation
p_transverse_tor33.519
p_staggered_tor18.811
p_scangle_it4.547
p_scbond_it2.929
p_mcangle_it2.704
p_mcbond_it2.05
p_planar_tor1.019
p_multtor_nbd0.215
p_singtor_nbd0.177
p_xyhbond_nbd0.169
RMS Deviations
KeyRefinement Restraint Deviation
p_transverse_tor33.519
p_staggered_tor18.811
p_scangle_it4.547
p_scbond_it2.929
p_mcangle_it2.704
p_mcbond_it2.05
p_planar_tor1.019
p_multtor_nbd0.215
p_singtor_nbd0.177
p_xyhbond_nbd0.169
p_xhyhbond_nbd0.162
p_chiral_restr0.08
p_angle_d0.03
p_planar_d0.03
p_bond_d0.009
p_plane_restr0.005
p_angle_deg
p_hb_or_metal_coord
p_orthonormal_tor
p_special_tor
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms2553
Nucleic Acid Atoms
Solvent Atoms233
Heterogen Atoms6

Software

Software
Software NamePurpose
AMoREphasing
PROLSQrefinement
MOSFLMdata reduction
CCP4data reduction
CCP4data scaling