7T1K | pdb_00007t1k

Crystal structure of a superbinder Fes SH2 domain (sFes1) in complex with a high affinity phosphopeptide

External Resource: Annotation

Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations
Protein Modification Annotation

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	SH2	e7t1kA1	A: a+b two layers	X: SH2 (From Topology)	H: SH2 (From Topology)	T: SH2	F: SH2	ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A	PF00017	SH2 domain (SH2)	SH2 domain		Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
B	Synthetic phosphotyrosine-containing Ezrin-derived peptide	cytoskeletal protein binding actin binding protein-containing complex binding protein binding binding actin filament binding microtubule binding tubulin binding cell adhesion molecule binding cadherin binding protein kinase A binding ATPase binding enzyme binding identical protein binding cytoskeletal protein binding actin binding protein-containing complex binding protein binding binding actin filament binding microtubule binding tubulin binding cell adhesion molecule binding cadherin binding protein kinase A binding ATPase binding enzyme binding identical protein binding protein domain specific binding RNA binding nucleic acid binding S100 protein binding protein kinase A regulatory subunit binding protein kinase A catalytic subunit binding kinase binding protein kinase binding disordered domain specific binding	multicellular organismal process regulation of cellular process negative regulation of biological process negative regulation of interleukin-2 production regulation of cytokine production cytokine production negative regulation of cellular process regulation of multicellular organismal process negative regulation of macromolecule metabolic process regulation of biosynthetic process regulation of interleukin-2 production regulation of biological process negative regulation of metabolic process biological regulation multicellular organismal process regulation of cellular process negative regulation of biological process negative regulation of interleukin-2 production regulation of cytokine production cytokine production negative regulation of cellular process regulation of multicellular organismal process negative regulation of macromolecule metabolic process regulation of biosynthetic process regulation of interleukin-2 production regulation of biological process negative regulation of metabolic process biological regulation interleukin-2 production negative regulation of cytokine production regulation of macromolecule metabolic process gene expression macromolecule biosynthetic process regulation of gene expression negative regulation of gene expression biosynthetic process negative regulation of biosynthetic process negative regulation of macromolecule biosynthetic process regulation of macromolecule biosynthetic process metabolic process cellular process macromolecule metabolic process negative regulation of multicellular organismal process regulation of metabolic process localization import into cell receptor internalization transport receptor-mediated endocytosis endocytosis establishment of localization vesicle-mediated transport membrane to membrane docking membrane docking positive regulation of biological process positive regulation of macromolecule biosynthetic process positive regulation of metabolic process positive regulation of gene expression positive regulation of biosynthetic process positive regulation of macromolecule metabolic process positive regulation of cellular process positive regulation of protein localization to plasma membrane regulation of localization cellular localization regulation of protein localization intracellular protein localization regulation of protein localization to membrane positive regulation of protein localization to cell periphery protein localization to cell periphery protein localization to plasma membrane positive regulation of protein localization to membrane regulation of protein localization to cell periphery localization within membrane protein localization to membrane regulation of cellular localization macromolecule localization positive regulation of protein localization regulation of protein localization to plasma membrane regulation of cellular component organization organelle assembly regulation of cellular component biogenesis regulation of organelle organization cellular component biogenesis cellular component organization organelle organization cellular component assembly regulation of organelle assembly cellular component organization or biogenesis cellular response to stimulus response to stimulus signaling negative regulation of signaling negative regulation of intracellular signal transduction regulation of signal transduction intracellular signal transduction negative regulation of cell communication cell communication regulation of intracellular signal transduction intracellular signaling cassette signal transduction regulation of signaling negative regulation of response to stimulus regulation of MAPK cascade negative regulation of signal transduction negative regulation of ERK1 and ERK2 cascade regulation of response to stimulus MAPK cascade regulation of cell communication ERK1 and ERK2 cascade regulation of ERK1 and ERK2 cascade negative regulation of MAPK cascade protein-containing complex localization actin cytoskeleton organization actin filament-based process cytoskeleton organization protein localization to cell cortex plasma membrane bounded cell projection organization cell projection organization plasma membrane bounded cell projection assembly microvillus organization microvillus assembly cell projection assembly cortical cytoskeleton organization membraneless organelle assembly terminal web assembly cortical actin cytoskeleton organization immune response-regulating cell surface receptor signaling pathway regulation of antigen receptor-mediated signaling pathway negative regulation of antigen receptor-mediated signaling pathway positive regulation of response to stimulus immune response-activating signaling pathway immune response-regulating signaling pathway positive regulation of immune response regulation of immune system process positive regulation of immune system process cell surface receptor signaling pathway immune response-activating cell surface receptor signaling pathway immune response regulation of T cell receptor signaling pathway T cell receptor signaling pathway negative regulation of T cell receptor signaling pathway negative regulation of immune system process immune system process regulation of immune response antigen receptor-mediated signaling pathway activation of immune response cell adhesion cell-cell adhesion leukocyte cell-cell adhesion RNA metabolic process regulation of primary metabolic process negative regulation of RNA biosynthetic process RNA biosynthetic process nucleobase-containing compound metabolic process DNA-templated transcription nucleic acid biosynthetic process regulation of RNA metabolic process transcription by RNA polymerase II negative regulation of nucleobase-containing compound metabolic process regulation of nucleobase-containing compound metabolic process regulation of RNA biosynthetic process regulation of transcription by RNA polymerase II negative regulation of DNA-templated transcription negative regulation of transcription by RNA polymerase II primary metabolic process nucleobase-containing compound biosynthetic process nucleic acid metabolic process regulation of DNA-templated transcription negative regulation of RNA metabolic process sphingolipid mediated signaling pathway sphingosine-1-phosphate receptor signaling pathway G protein-coupled receptor signaling pathway postsynapse organization postsynaptic cytoskeleton organization cell junction organization postsynaptic actin cytoskeleton organization synapse organization microtubule cytoskeleton organization cytoplasmic microtubule organization cortical microtubule organization microtubule-based process supramolecular fiber organization negative regulation of p38MAPK cascade p38MAPK cascade regulation of p38MAPK cascade establishment or maintenance of bipolar cell polarity establishment or maintenance of apical/basal cell polarity establishment or maintenance of cell polarity catabolic process positive regulation of protein metabolic process macromolecule catabolic process protein metabolic process regulation of protein metabolic process protein catabolic process regulation of catabolic process positive regulation of protein catabolic process positive regulation of catabolic process regulation of protein catabolic process cellular response to nitrogen compound response to organophosphorus response to oxygen-containing compound response to nitrogen compound response to purine-containing compound response to cAMP cellular response to oxygen-containing compound cellular response to chemical stimulus response to chemical cellular response to cAMP positive regulation of protein localization to early endosome protein localization to endosome protein localization to early endosome regulation of protein localization to endosome protein localization to organelle positive regulation of protein localization to endosome regulation of protein localization to early endosome developmental process regulation of developmental process regulation of cell shape cell morphogenesis regulation of cell morphogenesis anatomical structure morphogenesis anatomical structure development regulation of biological quality regulation of anatomical structure morphogenesis astral microtubule organization cell cycle spindle organization cell cycle process epithelium development endothelial cell differentiation cellular developmental process endothelium development cell development tissue development epithelial cell differentiation endothelial cell development epithelial cell development cell differentiation establishment of endothelial barrier filopodium assembly regulation of multicellular organism growth regulation of growth regulation of developmental growth developmental growth growth positive regulation of multicellular organism growth positive regulation of developmental process multicellular organism growth positive regulation of growth positive regulation of multicellular organismal process positive regulation of developmental growth positive regulation of early endosome to late endosome transport establishment of localization in cell positive regulation of intracellular transport regulation of intracellular transport regulation of transport intracellular transport regulation of vesicle-mediated transport endosomal transport vesicle-mediated transport between endosomal compartments regulation of early endosome to late endosome transport early endosome to late endosome transport positive regulation of transport establishment of organelle localization centrosome localization organelle localization microtubule organizing center localization establishment of centrosome localization actin filament organization actin filament bundle organization actin filament bundle assembly system process digestion intestinal absorption digestive system process intestinal D-glucose absorption intestinal hexose absorption regulation of cellular component size regulation of cell projection organization regulation of cell projection size regulation of microvillus length regulation of microvillus organization regulation of plasma membrane bounded cell projection organization regulation of anatomical structure size	cellular anatomical structure membrane apical part of cell extracellular exosome membrane-bounded organelle extracellular vesicle extracellular organelle extracellular region organelle extracellular space vesicle extracellular membrane-bounded organelle intracellular organelle intracellular anatomical structure cellular anatomical structure membrane apical part of cell extracellular exosome membrane-bounded organelle extracellular vesicle extracellular organelle extracellular region organelle extracellular space vesicle extracellular membrane-bounded organelle intracellular organelle intracellular anatomical structure cytoskeleton membraneless organelle intracellular membraneless organelle actin cytoskeleton cytoplasm cytosol plasma membrane plasma membrane bounded cell projection cell periphery cell projection actin-based cell projection plasma membrane region microvillus microvillus membrane cell projection membrane basal part of cell basal plasma membrane basolateral plasma membrane cluster of actin-based cell projections brush border cell-cell junction adherens junction anchoring junction cell junction ruffle cell leading edge perinuclear region of cytoplasm polymeric cytoskeletal fiber actin filament supramolecular fiber supramolecular polymer supramolecular complex cilium ciliary basal body microtubule organizing center microtubule cytoskeleton cell cortex cortical cytoskeleton filopodium focal adhesion cell-substrate junction apical plasma membrane leading edge membrane ruffle membrane protein-containing complex immunological synapse uropod cell trailing edge endosome intracellular vesicle intracellular membrane-bounded organelle endomembrane system cytoplasmic vesicle nucleus membrane-enclosed lumen nucleolus intracellular organelle lumen organelle lumen fibrillar center nuclear lumen membrane microdomain membrane raft plasma membrane raft
A	Tyrosine-protein kinase Fes/Fps	binding phospholipid binding lipid binding phosphatidylinositol binding protein binding signaling receptor binding immunoglobulin receptor binding protein tyrosine kinase activity catalytic activity, acting on a protein kinase activity protein kinase activity transferase activity catalytic activity phosphotransferase activity, alcohol group as acceptor binding phospholipid binding lipid binding phosphatidylinositol binding protein binding signaling receptor binding immunoglobulin receptor binding protein tyrosine kinase activity catalytic activity, acting on a protein kinase activity protein kinase activity transferase activity catalytic activity phosphotransferase activity, alcohol group as acceptor transferase activity, transferring phosphorus-containing groups adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding small molecule binding cytoskeletal protein binding microtubule binding tubulin binding non-membrane spanning protein tyrosine kinase activity	regulation of biological process cell adhesion regulation of cellular process regulation of cell adhesion biological regulation cellular process cellular component organization microtubule bundle formation organelle organization microtubule cytoskeleton organization microtubule-based process cellular component organization or biogenesis cytoskeleton organization myoblast proliferation regulation of biological process cell adhesion regulation of cellular process regulation of cell adhesion biological regulation cellular process cellular component organization microtubule bundle formation organelle organization microtubule cytoskeleton organization microtubule-based process cellular component organization or biogenesis cytoskeleton organization myoblast proliferation cell population proliferation developmental process multicellular organismal process heart development heart growth developmental growth cardiac muscle tissue development cardiac muscle cell proliferation growth animal organ development organ growth tissue development striated muscle tissue development circulatory system development multicellular organism development anatomical structure development muscle cell proliferation cardiac muscle tissue growth muscle tissue development striated muscle cell proliferation system development cellular developmental process regulation of developmental process positive regulation of biological process cell development regulation of cell differentiation regulation of cell development positive regulation of developmental process positive regulation of cell differentiation cell differentiation regulation of immune system process regulation of multicellular organismal process positive regulation of cellular process regulation of multicellular organismal development hemopoiesis regulation of myeloid cell differentiation myeloid cell differentiation immune system process positive regulation of myeloid cell differentiation regulation of hemopoiesis protein phosphorylation protein autophosphorylation phosphorylation primary metabolic process macromolecule modification phosphate-containing compound metabolic process metabolic process protein metabolic process macromolecule metabolic process protein modification process phosphorus metabolic process cellular response to stimulus response to nutrient levels response to stimulus response to lipid response to nutrient response to oxygen-containing compound response to vitamin cellular response to oxygen-containing compound cellular response to vitamin D cellular response to nutrient levels cellular response to chemical stimulus response to vitamin D cellular response to vitamin response to chemical cellular response to lipid cellular response to nutrient regulation of localization regulation of transport transport regulation of vesicle-mediated transport establishment of localization vesicle-mediated transport localization regulation of neuron projection development regulation of cellular component organization positive regulation of cellular component organization cell projection organization neuron projection development neurogenesis neuron differentiation positive regulation of neuron projection development positive regulation of cell projection organization plasma membrane bounded cell projection organization regulation of cell projection organization nervous system development generation of neurons neuron development regulation of plasma membrane bounded cell projection organization regulation of cell shape cell morphogenesis regulation of cell morphogenesis anatomical structure morphogenesis regulation of biological quality regulation of anatomical structure morphogenesis chemotaxis taxis response to external stimulus locomotion peptidyl-tyrosine modification peptidyl-amino acid modification peptidyl-tyrosine phosphorylation microtubule organizing center organization centrosome cycle cell cycle cell cycle process myeloid leukocyte differentiation regulation of leukocyte differentiation positive regulation of monocyte differentiation mononuclear cell differentiation positive regulation of hemopoiesis monocyte differentiation positive regulation of immune system process regulation of monocyte differentiation positive regulation of cell development regulation of myeloid leukocyte differentiation positive regulation of myeloid leukocyte differentiation positive regulation of multicellular organismal process positive regulation of leukocyte differentiation leukocyte differentiation positive regulation of organelle organization regulation of cytoskeleton organization regulation of microtubule polymerization or depolymerization cellular component biogenesis regulation of protein-containing complex assembly positive regulation of protein-containing complex assembly cellular component assembly microtubule polymerization or depolymerization positive regulation of protein polymerization protein-containing complex assembly protein polymerization positive regulation of microtubule polymerization or depolymerization protein-containing complex organization positive regulation of cellular component biogenesis positive regulation of cytoskeleton organization regulation of microtubule-based process microtubule polymerization positive regulation of supramolecular fiber organization regulation of cellular component biogenesis regulation of organelle organization positive regulation of microtubule polymerization regulation of protein polymerization regulation of microtubule polymerization regulation of supramolecular fiber organization supramolecular fiber organization regulation of microtubule cytoskeleton organization regulation of cell population proliferation regulation of cell motility regulation of locomotion cell motility establishment of organelle localization regulation of immune effector process regulation of myeloid leukocyte mediated immunity regulated exocytosis cell activation involved in immune response leukocyte degranulation myeloid leukocyte mediated immunity myeloid leukocyte activation establishment of localization in cell leukocyte mediated immunity immune response vacuolar localization mast cell degranulation immune effector process regulation of secretion regulation of leukocyte mediated immunity exocytosis lysosome localization cellular localization regulation of mast cell degranulation leukocyte activation regulation of regulated secretory pathway secretion by cell regulation of secretion by cell organelle localization leukocyte activation involved in immune response mast cell activation regulation of leukocyte degranulation mast cell mediated immunity secretion cell activation export from cell myeloid cell activation involved in immune response mast cell activation involved in immune response regulation of exocytosis	cellular anatomical structure anchoring junction cell junction focal adhesion cell-substrate junction intracellular anatomical structure cytoplasm cytosol cell periphery plasma membrane membrane intracellular organelle cytoskeleton organelle cellular anatomical structure anchoring junction cell junction focal adhesion cell-substrate junction intracellular anatomical structure cytoplasm cytosol cell periphery plasma membrane membrane intracellular organelle cytoskeleton organelle membraneless organelle intracellular membraneless organelle microtubule cytoskeleton membrane-bounded organelle cytoplasmic vesicle intracellular vesicle intracellular membrane-bounded organelle vesicle Golgi apparatus endomembrane system cytoplasmic side of plasma membrane cytoplasmic side of membrane side of membrane

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
B	IPR000299	FERM domain	Domain
B	IPR019748	FERM central domain	Domain
B	IPR018980	FERM, C-terminal PH-like domain	Domain
B	IPR000798	Ezrin/radixin/moesin-like	Family
B	IPR008954	Moesin tail domain superfamily	Homologous Superfamily
B	IPR035963	FERM superfamily, second domain	Homologous Superfamily
B	IPR011259	Ezrin/radixin/moesin, C-terminal	Domain
B	IPR019747	FERM conserved site	Conserved Site
B	IPR018979	FERM, N-terminal	Domain
B	IPR014352	FERM/acyl-CoA-binding protein superfamily	Homologous Superfamily
B	IPR041789	ERM family, FERM domain C-lobe	Domain
B	IPR011993	PH-like domain superfamily	Homologous Superfamily
B	IPR046810	Ezrin/radixin/moesin, alpha-helical domain	Domain
B	IPR019749	Band 4.1 domain	Domain
B	IPR011174	Ezrin/radixin/moesin	Family
B	IPR029071	Ubiquitin-like domain superfamily	Homologous Superfamily
A	IPR017441	Protein kinase, ATP binding site	Binding Site
A	IPR036860	SH2 domain superfamily	Homologous Superfamily
A	IPR008266	Tyrosine-protein kinase, active site	Active Site
A	IPR020635	Tyrosine-protein kinase, catalytic domain	Domain
A	IPR000980	SH2 domain	Domain
A	IPR000719	Protein kinase domain	Domain
A	IPR027267	AH/BAR domain superfamily	Homologous Superfamily
A	IPR001245	Serine-threonine/tyrosine-protein kinase, catalytic domain	Domain
A	IPR031160	F-BAR domain	Domain
A	IPR016250	Tyrosine-protein kinase, Fes/Fps type	Family
A	IPR011009	Protein kinase-like domain superfamily	Homologous Superfamily
A	IPR050198	Non-receptor tyrosine kinases involved in cell signaling	Family
A	IPR001060	FCH domain	Domain
A	IPR035849	Fes/Fps/Fer, SH2 domain	Domain

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
B	Pharos: P15311	prostate cancer Liver Cirrhosis, Experimental carcinoma sarcomatoid carcinoma invasive ductal breast carcinoma undifferentiated carcinoma lung cancer medulloblastoma adenoma oligodendroglioma breast cancer pancreatic ductal adenocarcinoma pancreatic intraductal papillary-mucinous neoplasm with low grade dysplasia Down syndrome exocrine pancreatic carcinoma prostate cancer Liver Cirrhosis, Experimental carcinoma sarcomatoid carcinoma invasive ductal breast carcinoma undifferentiated carcinoma lung cancer medulloblastoma adenoma oligodendroglioma breast cancer pancreatic ductal adenocarcinoma pancreatic intraductal papillary-mucinous neoplasm with low grade dysplasia Down syndrome exocrine pancreatic carcinoma rheumatoid arthritis glioblastoma transitional cell carcinoma juvenile dermatomyositis malignant ependymoma mammary neoplasms, animal myopathy amyotrophic lateral sclerosis osteoarthritis atypical teratoid rhabdoid tumor osteosarcoma breast carcinoma pancreatic intraductal papillary-mucinous carcinoma common variable immunodeficiency pituitary cancer Duchenne muscular dystrophy gastric cancer sarcoidosis interstitial cystitis tuberculosis malignant pancreatic neoplasm osteoarthritis susceptibility 1 Becker muscular dystrophy ovarian cancer pancreatic intraductal papillary-mucinous neoplasm diabetes mellitus polycystic ovary syndrome ductal breast carcinoma in situ psoriasis gastric carcinoma
A	Pharos: P07332	ALK fusion gene-positive non-small-cell lung cancer bipolar disorder endogenous depression myocardial infarction tuberculosis attention deficit hyperactivity disorder, inattentive type breast carcinoma heart disease non-small cell lung carcinoma autism spectrum disorder cancer hypertensive disorder osteosarcoma