7PLL | pdb_00007pll

Structure of the murine cortactin C-SH3 domain in complex with a Pyk2 proline-rich ligand

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2B Superfamily	SH3-domain	8065193	3000153	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	SH3_1	e7pllA1	A: beta barrels	X: SH3	H: SH3	T: SH3	F: SH3_1	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	2.30.30.40	Mainly Beta	Roll	SH3 type barrels.	SH3 Domains	CATH (utative)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A	PF14604	Variant SH3 domain (SH3_9)	Variant SH3 domain		Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
B	Pyk2-PRR2 peptide	protein tyrosine kinase activity catalytic activity, acting on a protein kinase activity protein kinase activity transferase activity catalytic activity phosphotransferase activity, alcohol group as acceptor transferase activity, transferring phosphorus-containing groups binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding protein tyrosine kinase activity catalytic activity, acting on a protein kinase activity protein kinase activity transferase activity catalytic activity phosphotransferase activity, alcohol group as acceptor transferase activity, transferring phosphorus-containing groups binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding small molecule binding non-membrane spanning protein tyrosine kinase activity protein serine/threonine kinase activity calcium/calmodulin-dependent protein kinase activity neurotransmitter receptor regulator activity molecular function regulator activity signaling receptor regulator activity ionotropic glutamate receptor binding protein binding signaling receptor binding glutamate receptor binding molecular function activator activity signaling receptor activator activity	cellular response to stimulus positive regulation of cell communication multicellular organismal process regulation of postsynaptic membrane potential system process regulation of cellular process positive regulation of signal transduction response to stimulus signaling modulation of chemical synaptic transmission regulation of system process positive regulation of excitatory postsynaptic potential positive regulation of biological process regulation of signal transduction chemical synaptic transmission, postsynaptic cellular response to stimulus positive regulation of cell communication multicellular organismal process regulation of postsynaptic membrane potential system process regulation of cellular process positive regulation of signal transduction response to stimulus signaling modulation of chemical synaptic transmission regulation of system process positive regulation of excitatory postsynaptic potential positive regulation of biological process regulation of signal transduction chemical synaptic transmission, postsynaptic cell communication positive regulation of response to stimulus synaptic signaling modulation of excitatory postsynaptic potential regulation of multicellular organismal process signal transduction regulation of biological quality positive regulation of cellular process trans-synaptic signaling regulation of biological process regulation of signaling cell surface receptor signaling pathway nervous system process biological regulation cell-cell signaling chemical synaptic transmission regulation of nervous system process regulation of trans-synaptic signaling regulation of response to stimulus anterograde trans-synaptic signaling regulation of cell communication cellular process excitatory postsynaptic potential regulation of membrane potential positive regulation of signaling regulation of cell-substrate adhesion positive regulation of cell adhesion regulation of cell adhesion cell-substrate adhesion positive regulation of cell-matrix adhesion cell adhesion cell-matrix adhesion positive regulation of cell-substrate adhesion regulation of cell-matrix adhesion apoptotic process cell death programmed cell death response to lipid response to oxygen-containing compound cellular response to oxygen-containing compound response to retinoic acid cellular response to chemical stimulus cellular response to retinoic acid response to chemical cellular response to lipid regulation of neuron projection development regulation of cellular component organization positive regulation of cellular component organization cellular developmental process cell projection organization cell development neuron projection development cellular component organization neurogenesis multicellular organism development neuron differentiation positive regulation of neuron projection development cell differentiation anatomical structure development positive regulation of cell projection organization cellular component organization or biogenesis system development developmental process plasma membrane bounded cell projection organization regulation of cell projection organization nervous system development generation of neurons neuron development regulation of plasma membrane bounded cell projection organization regulation of postsynaptic specialization assembly cellular component biogenesis cellular component assembly cell junction assembly regulation of excitatory synapse assembly postsynaptic density organization regulation of synapse structure or activity synapse organization regulation of synapse assembly regulation of postsynaptic density organization postsynapse organization organelle assembly postsynaptic specialization assembly postsynapse assembly regulation of postsynapse organization regulation of cellular component biogenesis regulation of organelle organization excitatory synapse assembly regulation of cell junction assembly regulation of synapse organization organelle organization cell junction organization regulation of organelle assembly postsynaptic specialization organization synapse assembly postsynaptic density assembly regulation of postsynaptic density assembly cellular response to stress response to stress response to fluid shear stress cellular response to fluid shear stress mononuclear cell differentiation mature B cell differentiation B cell activation involved in immune response lymphocyte activation cell activation involved in immune response lymphocyte differentiation marginal zone B cell differentiation leukocyte activation B cell differentiation leukocyte activation involved in immune response lymphocyte activation involved in immune response mature B cell differentiation involved in immune response immune response hemopoiesis B cell activation cell activation immune effector process immune system process leukocyte differentiation protein phosphorylation phosphorylation primary metabolic process macromolecule modification phosphate-containing compound metabolic process metabolic process protein metabolic process macromolecule metabolic process protein modification process phosphorus metabolic process defense response cellular defense response regulation of protein modification process positive regulation of phosphorylation regulation of catalytic activity regulation of protein phosphorylation positive regulation of protein metabolic process regulation of transferase activity positive regulation of phosphate metabolic process regulation of primary metabolic process positive regulation of metabolic process positive regulation of molecular function positive regulation of protein modification process positive regulation of macromolecule metabolic process positive regulation of protein kinase activity positive regulation of protein phosphorylation positive regulation of phosphorus metabolic process regulation of protein metabolic process positive regulation of catalytic activity regulation of protein kinase activity regulation of macromolecule metabolic process regulation of molecular function positive regulation of kinase activity regulation of kinase activity regulation of phosphorylation regulation of phosphorus metabolic process regulation of metabolic process protein-containing complex organization signal complex assembly protein-containing complex assembly negative regulation of potassium ion transport regulation of localization regulation of potassium ion transport transport regulation of transport negative regulation of monoatomic ion transport regulation of monoatomic ion transport negative regulation of biological process negative regulation of transport establishment of localization metal ion transport localization monoatomic ion transport potassium ion transport monoatomic cation transport regulation of metal ion transport intracellular signal transduction positive regulation of ERK1 and ERK2 cascade regulation of intracellular signal transduction intracellular signaling cassette positive regulation of MAPK cascade positive regulation of intracellular signal transduction regulation of MAPK cascade MAPK cascade ERK1 and ERK2 cascade regulation of ERK1 and ERK2 cascade synaptic transmission, glutamatergic regulation of synaptic transmission, glutamatergic positive regulation of synaptic transmission positive regulation of synaptic transmission, glutamatergic negative regulation of programmed cell death regulation of apoptotic process regulation of programmed cell death negative regulation of apoptotic process negative regulation of cellular process regulation of cytoskeleton organization regulation of actin filament-based process actin cytoskeleton organization regulation of actin cytoskeleton organization actin filament-based process cytoskeleton organization response to cytokine response to chemokine cytokine-mediated signaling pathway cellular response to chemokine chemokine-mediated signaling pathway response to peptide G protein-coupled receptor signaling pathway cellular response to cytokine stimulus cell population proliferation positive regulation of cell population proliferation regulation of cell population proliferation cortical cytoskeleton organization positive regulation of organelle organization regulation of cellular component size regulation of protein-containing complex assembly positive regulation of protein-containing complex assembly positive regulation of protein polymerization regulation of actin filament polymerization protein polymerization actin polymerization or depolymerization regulation of actin filament organization actin filament polymerization positive regulation of cellular component biogenesis positive regulation of cytoskeleton organization regulation of actin polymerization or depolymerization actin filament organization positive regulation of supramolecular fiber organization regulation of protein polymerization regulation of actin filament length regulation of supramolecular fiber organization supramolecular fiber organization positive regulation of actin filament polymerization regulation of anatomical structure size positive regulation of locomotion regulation of cell motility positive regulation of cell migration regulation of locomotion positive regulation of cell motility regulation of cell migration cell migration cell motility locomotion regulation of developmental process regulation of cell differentiation regulation of cell development negative regulation of cell differentiation regulation of immune system process regulation of multicellular organismal development negative regulation of developmental process regulation of myeloid cell differentiation negative regulation of myeloid cell differentiation myeloid cell differentiation regulation of hemopoiesis ligand-gated ion channel signaling pathway ionotropic glutamate receptor signaling pathway glutamate receptor signaling pathway positive regulation of receptor signaling pathway via STAT peptidyl-amino acid modification regulation of receptor signaling pathway via JAK-STAT activation of protein kinase activity regulation of receptor signaling pathway via STAT cell surface receptor signaling pathway via STAT peptidyl-tyrosine modification positive regulation of receptor signaling pathway via JAK-STAT activation of Janus kinase activity peptidyl-tyrosine phosphorylation cell surface receptor signaling pathway via JAK-STAT cell surface receptor protein tyrosine kinase signaling pathway vascular endothelial growth factor receptor signaling pathway enzyme-linked receptor protein signaling pathway Golgi organization endomembrane system organization protein autophosphorylation peptidyl-tyrosine autophosphorylation regulation of B cell chemotaxis positive regulation of chemotaxis regulation of lymphocyte chemotaxis taxis regulation of mononuclear cell migration positive regulation of immune system process chemotaxis regulation of leukocyte chemotaxis positive regulation of lymphocyte migration regulation of leukocyte migration lymphocyte migration response to external stimulus positive regulation of leukocyte chemotaxis leukocyte migration B cell chemotaxis regulation of response to external stimulus lymphocyte chemotaxis regulation of lymphocyte migration positive regulation of lymphocyte chemotaxis positive regulation of response to external stimulus positive regulation of mononuclear cell migration positive regulation of B cell chemotaxis cell chemotaxis positive regulation of leukocyte migration regulation of chemotaxis mononuclear cell migration leukocyte chemotaxis adaptive immune response blood vessel morphogenesis tube development angiogenesis sprouting angiogenesis vasculature development circulatory system development anatomical structure morphogenesis tube morphogenesis anatomical structure formation involved in morphogenesis blood vessel development positive regulation of JNK cascade JNK cascade regulation of JNK cascade ERBB signaling pathway epidermal growth factor receptor signaling pathway macrophage chemotaxis macrophage migration regulation of macrophage migration myeloid leukocyte migration regulation of macrophage chemotaxis cellular response to tumor necrosis factor tumor necrosis factor-mediated signaling pathway response to tumor necrosis factor regulation of calcium ion transport cellular localization inorganic ion homeostasis intracellular calcium ion homeostasis homeostatic process monoatomic ion transmembrane transport calcium ion homeostasis regulation of monoatomic ion transmembrane transport negative regulation of sequestering of calcium ion calcium ion transport maintenance of location in cell regulation of calcium ion transmembrane transport monoatomic cation transmembrane transport intracellular monoatomic cation homeostasis monoatomic ion homeostasis intracellular chemical homeostasis monoatomic cation homeostasis regulation of sequestering of calcium ion intracellular monoatomic ion homeostasis calcium ion transmembrane import into cytosol regulation of release of sequestered calcium ion into cytosol sequestering of calcium ion maintenance of location transmembrane transport release of sequestered calcium ion into cytosol regulation of transmembrane transport cellular homeostasis chemical homeostasis regulation of monoatomic cation transmembrane transport calcium ion transmembrane transport multicellular organismal-level homeostasis tissue remodeling bone remodeling anatomical structure homeostasis tissue homeostasis bone resorption endothelial cell migration positive regulation of endothelial cell migration regulation of endothelial cell migration catabolic process proteolysis involved in protein catabolic process macromolecule catabolic process regulation of ubiquitin-dependent protein catabolic process positive regulation of ubiquitin-dependent protein catabolic process regulation of proteolysis regulation of proteolysis involved in protein catabolic process modification-dependent macromolecule catabolic process proteolysis protein catabolic process regulation of catabolic process positive regulation of proteolysis involved in protein catabolic process positive regulation of catabolic process modification-dependent protein catabolic process positive regulation of proteolysis ubiquitin-dependent protein catabolic process integrin-mediated signaling pathway regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction positive regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction phosphatidylinositol 3-kinase/protein kinase B signal transduction neuron apoptotic process negative regulation of neuron apoptotic process regulation of neuron apoptotic process regulation of cell shape cell morphogenesis regulation of cell morphogenesis regulation of anatomical structure morphogenesis endothelin receptor signaling pathway negative regulation of cell population proliferation regulation of vasculature development positive regulation of developmental process positive regulation of angiogenesis positive regulation of vasculature development regulation of angiogenesis positive regulation of multicellular organismal process regulation of synaptic plasticity neuron migration long-term synaptic potentiation negative regulation of biomineral tissue development regulation of biomineral tissue development regulation of bone mineralization negative regulation of bone mineralization ossification biomineral tissue development bone mineralization animal organ development tissue development negative regulation of ossification negative regulation of multicellular organismal process regulation of ossification	cellular anatomical structure intracellular anatomical structure cytoplasm cytosol cell body anchoring junction cell junction focal adhesion cell-substrate junction protein-containing complex plasma membrane protein complex membrane plasma membrane membrane protein complex cellular anatomical structure intracellular anatomical structure cytoplasm cytosol cell body anchoring junction cell junction focal adhesion cell-substrate junction protein-containing complex plasma membrane protein complex membrane plasma membrane membrane protein complex transporter complex NMDA selective glutamate receptor complex receptor complex cell periphery ionotropic glutamate receptor complex neurotransmitter receptor complex transmembrane transporter complex plasma membrane signaling receptor complex monoatomic ion channel complex somatodendritic compartment apical dendrite cell projection dendrite dendritic tree neuron projection plasma membrane bounded cell projection cell leading edge lamellipodium synapse glutamatergic synapse intracellular organelle cytoskeleton organelle membraneless organelle intracellular membraneless organelle perinuclear region of cytoplasm neuronal cell body postsynaptic density, intracellular component postsynaptic specialization postsynaptic specialization, intracellular component postsynaptic density postsynapse neuron to neuron synapse asymmetric synapse cell cortex presynapse growth cone axon distal axon site of polarized growth membrane-bounded organelle nucleus intracellular membrane-bounded organelle
A	Src substrate cortactin	profilin binding protein binding binding proline-rich region binding protein-containing complex binding Arp2/3 complex binding	chemotaxis positive regulation of locomotion regulation of biological process response to stimulus regulation of response to external stimulus biological regulation positive regulation of biological process response to external stimulus regulation of chemotaxis positive regulation of chemotaxis positive regulation of response to stimulus positive regulation of response to external stimulus taxis regulation of response to stimulus response to chemical chemotaxis positive regulation of locomotion regulation of biological process response to stimulus regulation of response to external stimulus biological regulation positive regulation of biological process response to external stimulus regulation of chemotaxis positive regulation of chemotaxis positive regulation of response to stimulus positive regulation of response to external stimulus taxis regulation of response to stimulus response to chemical regulation of locomotion locomotion cellular component organization plasma membrane bounded cell projection organization cell projection organization lamellipodium organization cellular process cellular component organization or biogenesis cellular response to stimulus regulation of cellular process cell surface receptor signaling pathway signaling cell death extrinsic apoptotic signaling pathway cell communication apoptotic signaling pathway signal transduction apoptotic process programmed cell death organelle organization actin cytoskeleton organization actin filament-based process cytoskeleton organization substrate-dependent cell migration, cell extension plasma membrane bounded cell projection assembly cellular component biogenesis cellular component assembly substrate-dependent cell migration cell migration cell motility cell projection assembly multicellular organismal process cellular developmental process plasma membrane bounded cell projection morphogenesis cell development neuron projection development cell morphogenesis neurogenesis multicellular organism development cell projection morphogenesis neuron differentiation neuron projection morphogenesis cell differentiation anatomical structure development system development developmental process nervous system development generation of neurons anatomical structure morphogenesis neuron development axon extension regulation of growth axonogenesis regulation of cellular component size developmental growth regulation of biological quality developmental growth involved in morphogenesis regulation of cellular component organization regulation of developmental process cell growth regulation of axon extension regulation of extent of cell growth regulation of cell size neuron projection extension regulation of developmental growth developmental cell growth growth axon development regulation of cell growth cell morphogenesis involved in neuron differentiation regulation of anatomical structure size cell junction organization modification of postsynaptic actin cytoskeleton synapse organization modification of postsynaptic structure modification of synaptic structure cellular localization establishment of protein localization nitrogen compound transport transport intracellular transport establishment of localization localization protein transport establishment of localization in cell macromolecule localization intracellular protein localization intracellular protein transport regulation of cell projection assembly regulation of cell projection organization regulation of cellular component biogenesis dendritic spine maintenance dendritic spine organization postsynapse organization cellular component maintenance neuron projection organization catabolic process macroautophagy autophagy regulation of mitophagy regulation of catabolic process regulation of autophagy regulation of macroautophagy mitophagy metabolic process regulation of autophagy of mitochondrion process utilizing autophagic mechanism regulation of metabolic process autophagy of mitochondrion positive regulation of organelle organization regulation of cytoskeleton organization regulation of actin filament-based process positive regulation of cellular component organization regulation of protein-containing complex assembly positive regulation of protein-containing complex assembly positive regulation of protein polymerization protein-containing complex assembly regulation of actin filament polymerization positive regulation of cellular process protein polymerization actin polymerization or depolymerization regulation of actin filament organization actin filament polymerization protein-containing complex organization positive regulation of cellular component biogenesis positive regulation of cytoskeleton organization regulation of actin polymerization or depolymerization actin filament organization positive regulation of supramolecular fiber organization regulation of organelle organization regulation of protein polymerization regulation of actin filament length regulation of actin cytoskeleton organization regulation of supramolecular fiber organization supramolecular fiber organization positive regulation of actin filament polymerization system process positive regulation of smooth muscle contraction regulation of system process muscle contraction muscle system process regulation of muscle system process smooth muscle contraction regulation of muscle contraction regulation of smooth muscle contraction positive regulation of muscle contraction positive regulation of multicellular organismal process regulation of multicellular organismal process focal adhesion assembly cell-substrate junction assembly cell-substrate adhesion cell adhesion cell-matrix adhesion cell junction assembly cell-substrate junction organization negative regulation of signaling negative regulation of biological process regulation of signal transduction regulation of programmed cell death negative regulation of cell communication negative regulation of extrinsic apoptotic signaling pathway negative regulation of apoptotic signaling pathway negative regulation of cellular process regulation of signaling negative regulation of response to stimulus negative regulation of programmed cell death regulation of apoptotic process negative regulation of signal transduction regulation of extrinsic apoptotic signaling pathway negative regulation of apoptotic process regulation of cell communication regulation of apoptotic signaling pathway import into cell receptor-mediated endocytosis endocytosis vesicle-mediated transport	cellular anatomical structure cell junction anchoring junction focal adhesion cell-substrate junction cell projection cell leading edge plasma membrane bounded cell projection lamellipodium intracellular anatomical structure synapse intracellular membraneless organelle actin cytoskeleton intracellular organelle cellular anatomical structure cell junction anchoring junction focal adhesion cell-substrate junction cell projection cell leading edge plasma membrane bounded cell projection lamellipodium intracellular anatomical structure synapse intracellular membraneless organelle actin cytoskeleton intracellular organelle postsynapse cytoskeleton organelle membraneless organelle postsynaptic cytoskeleton postsynaptic actin cytoskeleton clathrin-coated pit membrane endomembrane system cell periphery cell cortex cytoplasm podosome cytosol growth cone axon distal axon neuron projection site of polarized growth glutamatergic synapse voltage-gated potassium channel complex protein-containing complex plasma membrane protein complex plasma membrane potassium channel complex membrane protein complex cation channel complex transporter complex transmembrane transporter complex monoatomic ion channel complex membrane-bounded organelle Golgi apparatus intracellular membrane-bounded organelle neuron spine dendritic spine somatodendritic compartment dendrite dendritic tree ruffle mitotic spindle spindle mitotic spindle midzone spindle midzone microtubule cytoskeleton polymeric cytoskeletal fiber actin filament supramolecular fiber supramolecular polymer supramolecular complex cortical cytoskeleton endoplasmic reticulum

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
B	IPR020635	Tyrosine-protein kinase, catalytic domain	Domain
B	IPR000719	Protein kinase domain	Domain
B	IPR017441	Protein kinase, ATP binding site	Binding Site
B	IPR014352	FERM/acyl-CoA-binding protein superfamily	Homologous Superfamily
B	IPR049385	FAK1-like, FERM domain C-lobe	Domain
B	IPR001245	Serine-threonine/tyrosine-protein kinase, catalytic domain	Domain
B	IPR019749	Band 4.1 domain	Domain
B	IPR029071	Ubiquitin-like domain superfamily	Homologous Superfamily
B	IPR000299	FERM domain	Domain
B	IPR041784	FAK1/PYK2, FERM domain C-lobe	Domain
B	IPR008266	Tyrosine-protein kinase, active site	Active Site
B	IPR019748	FERM central domain	Domain
B	IPR041390	Focal adhesion kinase, N-terminal	Domain
B	IPR035963	FERM superfamily, second domain	Homologous Superfamily
B	IPR036137	Focal adhesion kinase, targeting (FAT) domain superfamily	Homologous Superfamily
B	IPR011993	PH-like domain superfamily	Homologous Superfamily
B	IPR011009	Protein kinase-like domain superfamily	Homologous Superfamily
B	IPR005189	Focal adhesion kinase, targeting (FAT) domain	Domain
A	IPR036028	SH3-like domain superfamily	Homologous Superfamily
A	IPR003134	Hs1/Cortactin	Repeat
A	IPR035716	Cortactin, SH3 domain	Domain
A	IPR001452	SH3 domain	Domain

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
B	Pharos: Q14289	melanoma status epilepticus skin neoplasm skin cancer Petit mal status primitive neuroectodermal tumor subependymal giant cell astrocytoma astrocytic tumor malignant ependymoma oligodendroglioma Pick disease Takayasu arteritis atypical teratoid rhabdoid tumor cutaneous melanoma large cell medulloblastoma melanoma status epilepticus skin neoplasm skin cancer Petit mal status primitive neuroectodermal tumor subependymal giant cell astrocytoma astrocytic tumor malignant ependymoma oligodendroglioma Pick disease Takayasu arteritis atypical teratoid rhabdoid tumor cutaneous melanoma large cell medulloblastoma malignant glioma osteosarcoma pilocytic astrocytoma Alzheimer disease autism spectrum disorder glioblastoma lung carcinoma medulloblastoma non-small cell lung carcinoma