6SQX | pdb_00006sqx

Insights into a novel NlpC/P60 Endopeptidase from Photobacterium damselae subsp. piscicida

External Resource: Annotation


Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B
PF00877NlpC/P60 family (NLPC_P60)NlpC/P60 familyThe function of this domain is unknown. It is found in several lipoproteins. Domain
A, B
PF12913SH3 domain (SH3b1 type) (SH3_6)SH3 domain (SH3b1 type)This domain appears to be an SH3 domain of the SH3b1-type, and is just C-terminal to an N-terminal domain that is probably the stabilising domain for the structure from Swiss:Q72DN3, PDB:3m1u, which is a four-domain protein. The next domain is an SH3 ...This domain appears to be an SH3 domain of the SH3b1-type, and is just C-terminal to an N-terminal domain that is probably the stabilising domain for the structure from Swiss:Q72DN3, PDB:3m1u, which is a four-domain protein. The next domain is an SH3b2 and the last, the C-terminal region, is the catalytic domain of the cysteine-peptidase type, ie family NLPC_P60, Pfam:PF00877 (details derived from TOPSAN).
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B
Peptide-binding protein - -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B
IPR000064Endopeptidase, NLPC/P60 domainDomain
A, B
IPR027017Uncharacterised peptidase with NlpC/P60 domain, YkfC typeFamily
A, B
IPR038765Papain-like cysteine peptidase superfamilyHomologous Superfamily
A, B
IPR051202Peptidase C40Family
A, B
IPR039439SH3b1 domainDomain

Protein Modification Annotation

Modified Residue(s)
ChainResidue(s)Description
A, B
OCS Parent Component: CYS

RESID:  AA0556

PSI-MOD :  L-cysteic acid (L-cysteine sulfonic acid) MOD:00460