5XDH | pdb_00005xdh

His/DOPA ligated cytochrome c from an anammox organism KSU-1

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: ECOD Classification
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Protein Modification Annotation

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
D	d5xdhd_	All alpha proteins	Cytochrome c	Cytochrome c	automated matches	automated matches	(Candidatus Jettenia caeni ) [TaxId: 247490 ],	SCOPe (2.08)
C	d5xdhc_	All alpha proteins	Cytochrome c	Cytochrome c	automated matches	automated matches	(Candidatus Jettenia caeni ) [TaxId: 247490 ],	SCOPe (2.08)
B	d5xdhb_	All alpha proteins	Cytochrome c	Cytochrome c	automated matches	automated matches	(Candidatus Jettenia caeni ) [TaxId: 247490 ],	SCOPe (2.08)
A	d5xdha_	All alpha proteins	Cytochrome c	Cytochrome c	automated matches	automated matches	(Candidatus Jettenia caeni ) [TaxId: 247490 ],	SCOPe (2.08)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
D	V-set	e5xdhD1	A: a/b three-layered sandwiches	X: Periplasmic binding protein-like II	H: Rubredoxin-related	T: Tetrapyrrole methylase C-terminal domain	F: V-set	ECOD (v294.1)
C	V-set	e5xdhC1	A: a/b three-layered sandwiches	X: Periplasmic binding protein-like II	H: Rubredoxin-related	T: Tetrapyrrole methylase C-terminal domain	F: V-set	ECOD (v294.1)
B	V-set	e5xdhB1	A: a/b three-layered sandwiches	X: Periplasmic binding protein-like II	H: Rubredoxin-related	T: Tetrapyrrole methylase C-terminal domain	F: V-set	ECOD (v294.1)
A	V-set	e5xdhA1	A: a/b three-layered sandwiches	X: Periplasmic binding protein-like II	H: Rubredoxin-related	T: Tetrapyrrole methylase C-terminal domain	F: V-set	ECOD (v294.1)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D	Putative cytochrome c	binding tetrapyrrole binding heme binding electron transfer activity cation binding ion binding metal ion binding small molecule binding	-	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D	IPR036909	Cytochrome c-like domain superfamily	Homologous Superfamily
A, B, C, D	IPR009056	Cytochrome c-like domain	Domain

Protein Modification Annotation

Modified Residue(s)
Chain	Residue(s)	Description
A, B, C, D	DAH	Parent Component: TYR RESID: AA0146 PSI-MOD : 3'-hydroxylation of L-tyrosine to L-3',4'-dihydroxyphenylalanine MOD:00155

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.