5VXN
Structure of two RcsB dimers bound to two parallel DNAs.
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | GerE | e5vxnA1 | A: alpha arrays | X: HTH | H: HTH | T: tetra-helical, LuxR-like | F: GerE | ECOD (1.6) |
A | Response_reg | e5vxnA2 | A: a/b three-layered sandwiches | X: Flavodoxin-like | H: Class I glutamine amidotransferase-like | T: CheY-like | F: Response_reg | ECOD (1.6) |
B | GerE | e5vxnB2 | A: alpha arrays | X: HTH | H: HTH | T: tetra-helical, LuxR-like | F: GerE | ECOD (1.6) |
B | Response_reg | e5vxnB1 | A: a/b three-layered sandwiches | X: Flavodoxin-like | H: Class I glutamine amidotransferase-like | T: CheY-like | F: Response_reg | ECOD (1.6) |
E [auth C] | GerE | e5vxnC1 | A: alpha arrays | X: HTH | H: HTH | T: tetra-helical, LuxR-like | F: GerE | ECOD (1.6) |
E [auth C] | Response_reg | e5vxnC2 | A: a/b three-layered sandwiches | X: Flavodoxin-like | H: Class I glutamine amidotransferase-like | T: CheY-like | F: Response_reg | ECOD (1.6) |
F [auth D] | GerE | e5vxnD1 | A: alpha arrays | X: HTH | H: HTH | T: tetra-helical, LuxR-like | F: GerE | ECOD (1.6) |
F [auth D] | Response_reg | e5vxnD2 | A: a/b three-layered sandwiches | X: Flavodoxin-like | H: Class I glutamine amidotransferase-like | T: CheY-like | F: Response_reg | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A, B, E [auth C], F [auth D] | PF00072 | Response regulator receiver domain (Response_reg) | Response regulator receiver domain | This domain receives the signal from the sensor partner in bacterial two-component systems. It is usually found N-terminal to a DNA binding effector domain. | Domain |
A, B, E [auth C], F [auth D] | PF00196 | Bacterial regulatory proteins, luxR family (GerE) | Bacterial regulatory proteins, luxR family | - | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
A, B, E [auth C], F [auth D] | IPR011006 | CheY-like superfamily | Homologous Superfamily |
A, B, E [auth C], F [auth D] | IPR000792 | Transcription regulator LuxR, C-terminal | Domain |
A, B, E [auth C], F [auth D] | IPR030864 | Transcriptional regulatory protein RcsB | Family |
A, B, E [auth C], F [auth D] | IPR001789 | Signal transduction response regulator, receiver domain | Domain |
A, B, E [auth C], F [auth D] | IPR016032 | Signal transduction response regulator, C-terminal effector | Homologous Superfamily |
A, B, E [auth C], F [auth D] | IPR036388 | Winged helix-like DNA-binding domain superfamily | Homologous Superfamily |
A, B, E [auth C], F [auth D] | IPR051015 | RcsB family transcriptional regulators | Family |