3RMR
Crystal structure of Hyaloperonospora arabidopsidis ATR1 effector domain
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF21421 | e3rmrA2 | A: alpha arrays | X: WY-domain in RXLR effectors (From Topology) | H: WY-domain in RXLR effectors (From Topology) | T: WY-domain in RXLR effectors | F: PF21421 | ECOD (1.6) |
A | PF22223 | e3rmrA1 | A: alpha arrays | X: ATR1 N-terminal domain (From Topology) | H: ATR1 N-terminal domain (From Topology) | T: ATR1 N-terminal domain | F: PF22223 | ECOD (1.6) |
B | PF21421 | e3rmrB1 | A: alpha arrays | X: WY-domain in RXLR effectors (From Topology) | H: WY-domain in RXLR effectors (From Topology) | T: WY-domain in RXLR effectors | F: PF21421 | ECOD (1.6) |
B | PF22223 | e3rmrB2 | A: alpha arrays | X: ATR1 N-terminal domain (From Topology) | H: ATR1 N-terminal domain (From Topology) | T: ATR1 N-terminal domain | F: PF22223 | ECOD (1.6) |
C | PF21421 | e3rmrC2 | A: alpha arrays | X: WY-domain in RXLR effectors (From Topology) | H: WY-domain in RXLR effectors (From Topology) | T: WY-domain in RXLR effectors | F: PF21421 | ECOD (1.6) |
C | PF22223 | e3rmrC1 | A: alpha arrays | X: ATR1 N-terminal domain (From Topology) | H: ATR1 N-terminal domain (From Topology) | T: ATR1 N-terminal domain | F: PF22223 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 1.20.5.2710 | Mainly Alpha | Up-down Bundle | Single alpha-helices involved in coiled-coils or other helix-helix interfaces | CATH (4.3.0) | |
B | 1.20.5.2710 | Mainly Alpha | Up-down Bundle | Single alpha-helices involved in coiled-coils or other helix-helix interfaces | CATH (4.3.0) | |
C | 1.20.5.2710 | Mainly Alpha | Up-down Bundle | Single alpha-helices involved in coiled-coils or other helix-helix interfaces | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF21421 | Avirulence protein ATR1, WY-domain (ATR1_WY-dom) | Avirulence protein ATR1, WY-domain | Avirulence protein ATR1 is a secreted effector that acts as an elicitor of hypersensitive response (HR) specifically on plants. It activates the N-terminal Toll-interleukin-1 receptor (TIR) domain of Arabidopsis NLR RPP1 [1]. This entry represents t ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
Avirulence protein | - |
|
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR048935 | Avirulence protein ATR1, WY-domain | Domain |