Crystal structure of Hyaloperonospora arabidopsidis ATR1 effector domain
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| A | ATR1_N | e3rmrA1 | A: a/b three-layered sandwiches | X: SH3 | H: Flagellar hook protein flgE D2 domain | T: Flagellar hook protein flgE D2 domain | F: ATR1_N | ECOD (v294.1) |
| A | FlgE_D2 | e3rmrA2 | A: a/b three-layered sandwiches | X: SH3 | H: Flagellar hook protein flgE D2 domain | T: Flagellar hook protein flgE D2 domain | F: FlgE_D2 | ECOD (v294.1) |
| C | Amidase_2 | e3rmrC1 | A: a/b three-layered sandwiches | X: Sulfite reductase hemoprotein (SiRHP), domains 2 and 4 | H: Sulfite reductase hemoprotein (SiRHP), domains 2 and 4 | T: Sulfite reductase hemoprotein (SiRHP), domains 2 and 4 | F: Amidase_2 | ECOD (v294.1) |
| B | Amidase_2 | e3rmrB1 | A: a/b three-layered sandwiches | X: Sulfite reductase hemoprotein (SiRHP), domains 2 and 4 | H: Sulfite reductase hemoprotein (SiRHP), domains 2 and 4 | T: Sulfite reductase hemoprotein (SiRHP), domains 2 and 4 | F: Amidase_2 | ECOD (v294.1) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| A | 1.20.5.2710 | Mainly Alpha | Up-down Bundle | Single alpha-helices involved in coiled-coils or other helix-helix interfaces | CATH (4.3.0) | |
| C | 1.20.5.2710 | Mainly Alpha | Up-down Bundle | Single alpha-helices involved in coiled-coils or other helix-helix interfaces | CATH (4.3.0) | |
| B | 1.20.5.2710 | Mainly Alpha | Up-down Bundle | Single alpha-helices involved in coiled-coils or other helix-helix interfaces | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF22223 | ATR1 N-terminal domain (ATR1_N) | ATR1 N-terminal domain | Host-adapted plant pathogens secrete numerous effectors into the host extracellular spaces or inside cells. The A. thaliana TNL receptor RPP1 confers strain-specific immunity through recognition of H.arabidopsidis effector ATR1. ATR1 consists of two ... | Domain | |
| PF21421 | Avirulence protein ATR1, WY-domain (ATR1_WY-dom) | Avirulence protein ATR1, WY-domain | Avirulence protein ATR1 is a secreted effector that acts as an elicitor of hypersensitive response (HR) specifically on plants. It activates the N-terminal Toll-interleukin-1 receptor (TIR) domain of Arabidopsis NLR RPP1 [1]. This entry represents t ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| Avirulence protein | - |
|
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR048935 | Avirulence protein ATR1, WY-domain | Domain | |
| IPR053992 | ATR1, N-terminal domain | Domain |














