9HM0 | pdb_00009hm0

Translational activator Aep3 in complex with mRNA and the yeast mitochondrial ribosome


Experimental Data Snapshot

  • Method: ELECTRON MICROSCOPY
  • Resolution: 3.00 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 

Starting Models: experimental, in silico
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wwPDB Validation   3D Report Full Report


This is version 1.0 of the entry. See complete history


Literature

Translational activators align mRNAs at the small mitoribosomal subunit for translation initiation.

Bridgers, J.B.Carlstrom, A.Sherpa, D.Couvillion, M.T.Rovsnik, U.Gao, J.Wan, B.Shao, S.Ott, M.Churchman, L.S.

(2025) Nat Struct Mol Biol 

  • DOI: https://doi.org/10.1038/s41594-025-01726-y
  • Primary Citation of Related Structures:  
    9HLZ, 9HM0

  • PubMed Abstract: 

    Mitochondrial gene expression is essential for oxidative phosphorylation. Mitochondrial-encoded mRNAs are translated by dedicated mitochondrial ribosomes (mitoribosomes), whose regulation remains elusive. In Saccharomyces cerevisiae, nuclear-encoded mitochondrial translational activators (TAs) facilitate transcript-specific translation by a yet unknown mechanism. Here, we investigated the function of TAs containing RNA-binding pentatricopeptide repeats using selective mitoribosome profiling and cryo-electron microscopy (cryo-EM) structural analysis. These analyses show that TAs exhibit strong selectivity for mitoribosomes initiating on their target transcripts. Moreover, TA-mitoribosome footprints indicate that TAs recruit mitoribosomes proximal to the start codon. Two cryo-EM structures of mRNA-TA complexes bound to mitoribosomes stalled in the post-initiation, pre-elongation state revealed the general mechanism of TA action. Specifically, the TAs bind to structural elements in the 5' untranslated region of the client mRNA and the mRNA channel exit to align the mRNA in the small subunit during initiation. Our findings provide a mechanistic basis for understanding how mitochondria achieve transcript-specific translation initiation without relying on general sequence elements to position mitoribosomes at start codons.


  • Organizational Affiliation
    • Department of Genetics, Blavatnik Institute, Harvard Medical School, Boston, MA, USA.

Macromolecules

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Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
Small ribosomal subunit protein mS38A [auth 1]111Saccharomyces cerevisiae W303Mutation(s): 0 
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Entity ID: 2
MoleculeChains Sequence LengthOrganismDetailsImage
Small ribosomal subunit protein mS41B [auth 2]130Saccharomyces cerevisiae W303Mutation(s): 0 
UniProt
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Entity ID: 3
MoleculeChains Sequence LengthOrganismDetailsImage
Small ribosomal subunit protein mS42C [auth 3]266Saccharomyces cerevisiae W303Mutation(s): 0 
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Entity ID: 4
MoleculeChains Sequence LengthOrganismDetailsImage
Small ribosomal subunit protein mS43D [auth 4]321Saccharomyces cerevisiae W303Mutation(s): 0 
UniProt
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Entity ID: 5
MoleculeChains Sequence LengthOrganismDetailsImage
Small ribosomal subunit protein mS27E [auth 5]339Saccharomyces cerevisiae W303Mutation(s): 0 
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Entity ID: 6
MoleculeChains Sequence LengthOrganismDetailsImage
Small ribosomal subunit protein mS45F [auth 6]345Saccharomyces cerevisiae W303Mutation(s): 0 
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Entity ID: 7
MoleculeChains Sequence LengthOrganismDetailsImage
Small ribosomal subunit protein mS46G [auth 7]361Saccharomyces cerevisiae W303Mutation(s): 0 
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Entity ID: 8
MoleculeChains Sequence LengthOrganismDetailsImage
Small ribosomal subunit protein mS47H [auth 8]500Saccharomyces cerevisiae W303Mutation(s): 0 
EC: 3.1.2.4
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Entity ID: 9
MoleculeChains Sequence LengthOrganismDetailsImage
Small ribosomal subunit protein bS1mI [auth A]344Saccharomyces cerevisiae W303Mutation(s): 0 
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Entity ID: 10
MoleculeChains Sequence LengthOrganismDetailsImage
Small ribosomal subunit protein uS2mJ [auth B]394Saccharomyces cerevisiae W303Mutation(s): 0 
UniProt
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Entity ID: 11
MoleculeChains Sequence LengthOrganismDetailsImage
Small ribosomal subunit protein uS3mK [auth C]398Saccharomyces cerevisiae W303Mutation(s): 0 
UniProt
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Entity ID: 12
MoleculeChains Sequence LengthOrganismDetailsImage
Small ribosomal subunit protein uS4mL [auth D]486Saccharomyces cerevisiae W303Mutation(s): 0 
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Entity ID: 13
MoleculeChains Sequence LengthOrganismDetailsImage
Small ribosomal subunit protein uS5mM [auth E]307Saccharomyces cerevisiae W303Mutation(s): 0 
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Entity ID: 14
MoleculeChains Sequence LengthOrganismDetailsImage
Small ribosomal subunit protein bS6mN [auth F]131Saccharomyces cerevisiae W303Mutation(s): 0 
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Entity ID: 15
MoleculeChains Sequence LengthOrganismDetailsImage
Small ribosomal subunit protein uS7mO [auth G]247Saccharomyces cerevisiae W303Mutation(s): 0 
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Entity ID: 16
MoleculeChains Sequence LengthOrganismDetailsImage
Small ribosomal subunit protein uS8mP [auth H]155Saccharomyces cerevisiae W303Mutation(s): 0 
UniProt
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Entity ID: 17
MoleculeChains Sequence LengthOrganismDetailsImage
Small ribosomal subunit protein uS9mQ [auth I]278Saccharomyces cerevisiae W303Mutation(s): 0 
UniProt
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Entity ID: 18
MoleculeChains Sequence LengthOrganismDetailsImage
Small ribosomal subunit protein uS10mR [auth J]203Saccharomyces cerevisiae W303Mutation(s): 0 
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Entity ID: 19
MoleculeChains Sequence LengthOrganismDetailsImage
Small ribosomal subunit protein uS11mS [auth K]217Saccharomyces cerevisiae W303Mutation(s): 0 
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Entity ID: 20
MoleculeChains Sequence LengthOrganismDetailsImage
Small ribosomal subunit protein uS12mT [auth L]153Saccharomyces cerevisiae W303Mutation(s): 0 
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Entity ID: 21
MoleculeChains Sequence LengthOrganismDetailsImage
Small ribosomal subunit protein uS13mU [auth M]143Saccharomyces cerevisiae W303Mutation(s): 0 
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Entity ID: 22
MoleculeChains Sequence LengthOrganismDetailsImage
Small ribosomal subunit protein uS14mV [auth N]115Saccharomyces cerevisiae W303Mutation(s): 0 
UniProt
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Entity ID: 23
MoleculeChains Sequence LengthOrganismDetailsImage
Small ribosomal subunit protein uS15mW [auth O]286Saccharomyces cerevisiae W303Mutation(s): 0 
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Entity ID: 24
MoleculeChains Sequence LengthOrganismDetailsImage
Small ribosomal subunit protein bS16mX [auth P]121Saccharomyces cerevisiae W303Mutation(s): 0 
UniProt
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Entity ID: 25
MoleculeChains Sequence LengthOrganismDetailsImage
Small ribosomal subunit protein uS17mY [auth Q]237Saccharomyces cerevisiae W303Mutation(s): 0 
UniProt
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Entity ID: 26
MoleculeChains Sequence LengthOrganismDetailsImage
Small ribosomal subunit protein bS18mZ [auth R]138Saccharomyces cerevisiae W303Mutation(s): 0 
UniProt
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Entity ID: 27
MoleculeChains Sequence LengthOrganismDetailsImage
Small ribosomal subunit protein uS19mAA [auth S]91Saccharomyces cerevisiae W303Mutation(s): 0 
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Entity ID: 28
MoleculeChains Sequence LengthOrganismDetailsImage
Small ribosomal subunit protein bS21mBA [auth T]177Saccharomyces cerevisiae W303Mutation(s): 0 
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Entity ID: 29
MoleculeChains Sequence LengthOrganismDetailsImage
Small ribosomal subunit protein mS23CA [auth U]264Saccharomyces cerevisiae W303Mutation(s): 0 
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Entity ID: 30
MoleculeChains Sequence LengthOrganismDetailsImage
Small ribosomal subunit protein mS29DA [auth W]450Saccharomyces cerevisiae W303Mutation(s): 0 
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Entity ID: 31
MoleculeChains Sequence LengthOrganismDetailsImage
Small ribosomal subunit protein mS33EA [auth X]110Saccharomyces cerevisiae W303Mutation(s): 0 
UniProt
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Entity ID: 32
MoleculeChains Sequence LengthOrganismDetailsImage
Small ribosomal subunit protein mS35FA [auth Y]319Saccharomyces cerevisiae W303Mutation(s): 0 
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Entity ID: 33
MoleculeChains Sequence LengthOrganismDetailsImage
Small ribosomal subunit protein mS37GA [auth Z]95Saccharomyces cerevisiae W303Mutation(s): 0 
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Entity ID: 34
MoleculeChains Sequence LengthOrganismDetailsImage
ATPase expression protein 3HA [auth a]606Saccharomyces cerevisiae W303Mutation(s): 0 
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Entity ID: 36
MoleculeChains Sequence LengthOrganismDetailsImage
Large ribosomal subunit protein bL36mJA [auth 00]93Saccharomyces cerevisiae W303Mutation(s): 0 
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Entity ID: 37
MoleculeChains Sequence LengthOrganismDetailsImage
Large ribosomal subunit protein mL38KA [auth 11]367Saccharomyces cerevisiae W303Mutation(s): 0 
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Entity ID: 38
MoleculeChains Sequence LengthOrganismDetailsImage
Large ribosomal subunit protein mL40LA [auth 22]147Saccharomyces cerevisiae W303Mutation(s): 0 
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Entity ID: 39
MoleculeChains Sequence LengthOrganismDetailsImage
Large ribosomal subunit protein mL41MA [auth 33]146Saccharomyces cerevisiaeMutation(s): 0 
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Entity ID: 40
MoleculeChains Sequence LengthOrganismDetailsImage
Large ribosomal subunit protein mL43NA [auth 44]140Saccharomyces cerevisiae W303Mutation(s): 0 
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Entity ID: 41
MoleculeChains Sequence LengthOrganismDetailsImage
Large ribosomal subunit protein mL44OA [auth 55]390Saccharomyces cerevisiae W303Mutation(s): 0 
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Entity ID: 42
MoleculeChains Sequence LengthOrganismDetailsImage
Large ribosomal subunit protein mL46PA [auth 66]281Saccharomyces cerevisiae W303Mutation(s): 0 
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Entity ID: 43
MoleculeChains Sequence LengthOrganismDetailsImage
Large ribosomal subunit protein mL49QA [auth 77]146Saccharomyces cerevisiae W303Mutation(s): 0 
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Entity ID: 44
MoleculeChains Sequence LengthOrganismDetailsImage
Large ribosomal subunit protein mL50RA [auth 88]264Saccharomyces cerevisiae W303Mutation(s): 0 
UniProt
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Entity ID: 45
MoleculeChains Sequence LengthOrganismDetailsImage
Large ribosomal subunit protein mL57SA [auth 99]253Saccharomyces cerevisiae W303Mutation(s): 0 
UniProt
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Entity ID: 47
MoleculeChains Sequence LengthOrganismDetailsImage
Large ribosomal subunit protein uL2mUA [auth BB]393Saccharomyces cerevisiae W303Mutation(s): 0 
UniProt
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UniProt GroupP32611
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Entity ID: 48
MoleculeChains Sequence LengthOrganismDetailsImage
Large ribosomal subunit protein uL3mVA [auth CC]269Saccharomyces cerevisiae W303Mutation(s): 0 
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Entity ID: 49
MoleculeChains Sequence LengthOrganismDetailsImage
Large ribosomal subunit protein uL4mWA [auth DD]286Saccharomyces cerevisiae W303Mutation(s): 0 
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Entity ID: 50
MoleculeChains Sequence LengthOrganismDetailsImage
Large ribosomal subunit protein uL5mXA [auth EE]292Saccharomyces cerevisiae W303Mutation(s): 0 
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Entity ID: 51
MoleculeChains Sequence LengthOrganismDetailsImage
Large ribosomal subunit protein uL6mYA [auth FF]214Saccharomyces cerevisiae W303Mutation(s): 0 
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Entity ID: 52
MoleculeChains Sequence LengthOrganismDetailsImage
Large ribosomal subunit protein bL9mZA [auth GG]139Saccharomyces cerevisiae W303Mutation(s): 0 
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Entity ID: 53
MoleculeChains Sequence LengthOrganismDetailsImage
Large ribosomal subunit protein uL13mAB [auth HH]163Saccharomyces cerevisiae W303Mutation(s): 0 
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Entity ID: 54
MoleculeChains Sequence LengthOrganismDetailsImage
Large ribosomal subunit protein uL14mBB [auth II]138Saccharomyces cerevisiae W303Mutation(s): 0 
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Entity ID: 55
MoleculeChains Sequence LengthOrganismDetailsImage
Large ribosomal subunit protein uL15mCB [auth JJ]322Saccharomyces cerevisiae W303Mutation(s): 0 
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Entity ID: 56
MoleculeChains Sequence LengthOrganismDetailsImage
Large ribosomal subunit protein uL16mDB [auth KK]232Saccharomyces cerevisiae W303Mutation(s): 0 
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Entity ID: 57
MoleculeChains Sequence LengthOrganismDetailsImage
Large ribosomal subunit protein bL17mEB [auth LL]238Saccharomyces cerevisiae W303Mutation(s): 0 
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Entity ID: 58
MoleculeChains Sequence LengthOrganismDetailsImage
Large ribosomal subunit protein bL19mFB [auth MM]169Saccharomyces cerevisiae W303Mutation(s): 0 
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Entity ID: 59
MoleculeChains Sequence LengthOrganismDetailsImage
Large ribosomal subunit protein bL21mGB [auth NN]161Saccharomyces cerevisiae W303Mutation(s): 0 
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Entity ID: 60
MoleculeChains Sequence LengthOrganismDetailsImage
Large ribosomal subunit protein uL22mHB [auth OO]309Saccharomyces cerevisiae W303Mutation(s): 0 
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Entity ID: 61
MoleculeChains Sequence LengthOrganismDetailsImage
Large ribosomal subunit protein uL23mIB [auth PP]263Saccharomyces cerevisiae W303Mutation(s): 0 
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Entity ID: 62
MoleculeChains Sequence LengthOrganismDetailsImage
Large ribosomal subunit protein uL24mJB [auth QQ]297Saccharomyces cerevisiae W303Mutation(s): 0 
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Entity ID: 63
MoleculeChains Sequence LengthOrganismDetailsImage
Large ribosomal subunit protein bL27mKB [auth RR]371Saccharomyces cerevisiae W303Mutation(s): 0 
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Entity ID: 64
MoleculeChains Sequence LengthOrganismDetailsImage
Large ribosomal subunit protein bL28mLB [auth SS]258Saccharomyces cerevisiae W303Mutation(s): 0 
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Entity ID: 65
MoleculeChains Sequence LengthOrganismDetailsImage
Large ribosomal subunit protein uL29mMB [auth TT]319Saccharomyces cerevisiae W303Mutation(s): 0 
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Entity ID: 66
MoleculeChains Sequence LengthOrganismDetailsImage
Large ribosomal subunit protein uL30mNB [auth UU]86Saccharomyces cerevisiae W303Mutation(s): 0 
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Entity ID: 67
MoleculeChains Sequence LengthOrganismDetailsImage
Small ribosomal subunit protein mS26OB [auth V]318Saccharomyces cerevisiae W303Mutation(s): 0 
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Entity ID: 68
MoleculeChains Sequence LengthOrganismDetailsImage
Large ribosomal subunit protein bL31mPB [auth VV]177Saccharomyces cerevisiae W303Mutation(s): 0 
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Entity ID: 69
MoleculeChains Sequence LengthOrganismDetailsImage
Large ribosomal subunit protein bL32mQB [auth WW]183Saccharomyces cerevisiae W303Mutation(s): 0 
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Entity ID: 70
MoleculeChains Sequence LengthOrganismDetailsImage
Large ribosomal subunit protein bL33mRB [auth XX]70Saccharomyces cerevisiae W303Mutation(s): 0 
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Entity ID: 71
MoleculeChains Sequence LengthOrganismDetailsImage
Large ribosomal subunit protein bL34mSB [auth YY]105Saccharomyces cerevisiae W303Mutation(s): 0 
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Entity ID: 72
MoleculeChains Sequence LengthOrganismDetailsImage
Large ribosomal subunit protein bL35mTB [auth ZZ]115Saccharomyces cerevisiae W303Mutation(s): 0 
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Entity ID: 73
MoleculeChains Sequence LengthOrganismDetailsImage
Large ribosomal subunit protein mL58UB [auth aa]195Saccharomyces cerevisiae W303Mutation(s): 0 
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Entity ID: 74
MoleculeChains Sequence LengthOrganismDetailsImage
Large ribosomal subunit protein mL59VB [auth bb]157Saccharomyces cerevisiae W303Mutation(s): 0 
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Entity ID: 75
MoleculeChains Sequence LengthOrganismDetailsImage
Large ribosomal subunit protein mL60WB [auth cc]131Saccharomyces cerevisiae W303Mutation(s): 0 
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Entity ID: 76
MoleculeChains Sequence LengthOrganismDetailsImage
Large ribosomal subunit protein mL67XB [auth dd]226Saccharomyces cerevisiae W303Mutation(s): 0 
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Entity ID: 35
MoleculeChains LengthOrganismImage
E/E-site formyl-methionine tRNAIA [auth t]76Saccharomyces cerevisiae W303
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Entity ID: 46
MoleculeChains LengthOrganismImage
21S mitochondrial rRNATA [auth AA]3,296Saccharomyces cerevisiae W303
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Entity ID: 77
MoleculeChains LengthOrganismImage
15S mitochondrial rRNAYB [auth r]1,649Saccharomyces cerevisiae W303
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Small Molecules
Ligands 2 Unique
IDChains Name / Formula / InChI Key2D Diagram3D Interactions
GTP (Subject of Investigation/LOI)
Query on GTP

Download Ideal Coordinates CCD File 
GC [auth W]GUANOSINE-5'-TRIPHOSPHATE
C10 H16 N5 O14 P3
XKMLYUALXHKNFT-UUOKFMHZSA-N
MG (Subject of Investigation/LOI)
Query on MG

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AC [auth B]
AD [auth AA]
AE [auth AA]
AF [auth AA]
AG [auth AA]
AC [auth B],
AD [auth AA],
AE [auth AA],
AF [auth AA],
AG [auth AA],
AH [auth AA],
AI [auth AA],
AJ [auth AA],
AK [auth r],
AL [auth r],
AM [auth r],
AN [auth r],
AO [auth r],
BC [auth E],
BD [auth AA],
BE [auth AA],
BF [auth AA],
BG [auth AA],
BH [auth AA],
BI [auth AA],
BJ [auth AA],
BK [auth r],
BL [auth r],
BM [auth r],
BN [auth r],
BO [auth r],
CC [auth E],
CD [auth AA],
CE [auth AA],
CF [auth AA],
CG [auth AA],
CH [auth AA],
CI [auth AA],
CJ [auth AA],
CK [auth r],
CL [auth r],
CM [auth r],
CN [auth r],
CO [auth r],
DC [auth K],
DD [auth AA],
DE [auth AA],
DF [auth AA],
DG [auth AA],
DH [auth AA],
DI [auth AA],
DJ [auth AA],
DK [auth r],
DL [auth r],
DM [auth r],
DN [auth r],
DO [auth r],
EC [auth M],
ED [auth AA],
EE [auth AA],
EF [auth AA],
EG [auth AA],
EH [auth AA],
EI [auth AA],
EJ [auth AA],
EK [auth r],
EL [auth r],
EM [auth r],
EN [auth r],
EO [auth r],
FC [auth P],
FD [auth AA],
FE [auth AA],
FF [auth AA],
FG [auth AA],
FH [auth AA],
FI [auth AA],
FJ [auth AA],
FK [auth r],
FL [auth r],
FM [auth r],
FN [auth r],
GD [auth AA],
GE [auth AA],
GF [auth AA],
GG [auth AA],
GH [auth AA],
GI [auth AA],
GJ [auth AA],
GK [auth r],
GL [auth r],
GM [auth r],
GN [auth r],
HC [auth W],
HD [auth AA],
HE [auth AA],
HF [auth AA],
HG [auth AA],
HH [auth AA],
HI [auth AA],
HJ [auth AA],
HK [auth r],
HL [auth r],
HM [auth r],
HN [auth r],
IC [auth AA],
ID [auth AA],
IE [auth AA],
IF [auth AA],
IG [auth AA],
IH [auth AA],
II [auth AA],
IJ [auth AA],
IK [auth r],
IL [auth r],
IM [auth r],
IN [auth r],
JC [auth AA],
JD [auth AA],
JE [auth AA],
JF [auth AA],
JG [auth AA],
JH [auth AA],
JI [auth AA],
JJ [auth AA],
JK [auth r],
JL [auth r],
JM [auth r],
JN [auth r],
KC [auth AA],
KD [auth AA],
KE [auth AA],
KF [auth AA],
KG [auth AA],
KH [auth AA],
KI [auth AA],
KJ [auth AA],
KK [auth r],
KL [auth r],
KM [auth r],
KN [auth r],
LC [auth AA],
LD [auth AA],
LE [auth AA],
LF [auth AA],
LG [auth AA],
LH [auth AA],
LI [auth AA],
LJ [auth AA],
LK [auth r],
LL [auth r],
LM [auth r],
LN [auth r],
MC [auth AA],
MD [auth AA],
ME [auth AA],
MF [auth AA],
MG [auth AA],
MH [auth AA],
MI [auth AA],
MJ [auth AA],
MK [auth r],
ML [auth r],
MM [auth r],
MN [auth r],
NC [auth AA],
ND [auth AA],
NE [auth AA],
NF [auth AA],
NG [auth AA],
NH [auth AA],
NI [auth AA],
NJ [auth AA],
NK [auth r],
NL [auth r],
NM [auth r],
NN [auth r],
OC [auth AA],
OD [auth AA],
OE [auth AA],
OF [auth AA],
OG [auth AA],
OH [auth AA],
OI [auth AA],
OJ [auth AA],
OK [auth r],
OL [auth r],
OM [auth r],
ON [auth r],
PC [auth AA],
PD [auth AA],
PE [auth AA],
PF [auth AA],
PG [auth AA],
PH [auth AA],
PI [auth AA],
PJ [auth AA],
PK [auth r],
PL [auth r],
PM [auth r],
PN [auth r],
QC [auth AA],
QD [auth AA],
QE [auth AA],
QF [auth AA],
QG [auth AA],
QH [auth AA],
QI [auth AA],
QJ [auth AA],
QK [auth r],
QL [auth r],
QM [auth r],
QN [auth r],
RC [auth AA],
RD [auth AA],
RE [auth AA],
RF [auth AA],
RG [auth AA],
RH [auth AA],
RI [auth AA],
RJ [auth AA],
RK [auth r],
RL [auth r],
RM [auth r],
RN [auth r],
SC [auth AA],
SD [auth AA],
SE [auth AA],
SF [auth AA],
SG [auth AA],
SH [auth AA],
SI [auth AA],
SJ [auth AA],
SK [auth r],
SL [auth r],
SM [auth r],
SN [auth r],
TC [auth AA],
TD [auth AA],
TE [auth AA],
TF [auth AA],
TG [auth AA],
TH [auth AA],
TI [auth AA],
TJ [auth AA],
TK [auth r],
TL [auth r],
TM [auth r],
TN [auth r],
UC [auth AA],
UD [auth AA],
UE [auth AA],
UF [auth AA],
UG [auth AA],
UH [auth AA],
UI [auth AA],
UJ [auth BB],
UK [auth r],
UL [auth r],
UM [auth r],
UN [auth r],
VC [auth AA],
VD [auth AA],
VE [auth AA],
VF [auth AA],
VG [auth AA],
VH [auth AA],
VI [auth AA],
VJ [auth BB],
VK [auth r],
VL [auth r],
VM [auth r],
VN [auth r],
WC [auth AA],
WD [auth AA],
WE [auth AA],
WF [auth AA],
WG [auth AA],
WH [auth AA],
WI [auth AA],
WJ [auth CC],
WK [auth r],
WL [auth r],
WM [auth r],
WN [auth r],
XC [auth AA],
XD [auth AA],
XE [auth AA],
XF [auth AA],
XG [auth AA],
XH [auth AA],
XI [auth AA],
XJ [auth NN],
XK [auth r],
XL [auth r],
XM [auth r],
XN [auth r],
YC [auth AA],
YD [auth AA],
YE [auth AA],
YF [auth AA],
YG [auth AA],
YH [auth AA],
YI [auth AA],
YJ [auth dd],
YK [auth r],
YL [auth r],
YM [auth r],
YN [auth r],
ZB [auth 1],
ZC [auth AA],
ZD [auth AA],
ZE [auth AA],
ZF [auth AA],
ZG [auth AA],
ZH [auth AA],
ZI [auth AA],
ZJ [auth r],
ZK [auth r],
ZL [auth r],
ZM [auth r],
ZN [auth r]
MAGNESIUM ION
Mg
JLVVSXFLKOJNIY-UHFFFAOYSA-N
Experimental Data & Validation

Experimental Data

  • Method: ELECTRON MICROSCOPY
  • Resolution: 3.00 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 
EM Software:
TaskSoftware PackageVersion
MODEL REFINEMENTPHENIX1.21_5207:
RECONSTRUCTIONcryoSPARC

Structure Validation

View Full Validation Report



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
Knut and Alice Wallenberg FoundationSweden--

Revision History  (Full details and data files)

  • Version 1.0: 2025-12-17
    Type: Initial release