9H4Q | pdb_00009h4q

Cryo-EM structure of the SEAC wing - EGOC

Experimental Data Snapshot

  • Method: ELECTRON MICROSCOPY
  • Resolution: 3.10 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 

Starting Models: experimental, in silico
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wwPDB Validation   3D Report Full Report


This is version 1.0 of the entry. See complete history. 


Literature

Structure and function of the yeast amino acid-sensing SEAC-EGOC supercomplex

Tafur, L., Bonadei, L., Zheng, Y., Loewith, R.

To be published.

Macromolecules
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Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
Maintenance of telomere capping protein 5A [auth C]1,148Saccharomyces cerevisiaeMutation(s): 0 
UniProt
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Entity ID: 2
MoleculeChains Sequence LengthOrganismDetailsImage
GTP-binding protein GTR1B [auth a]310Saccharomyces cerevisiaeMutation(s): 0 
Gene Names: GTR1, YML121W, YM7056.05
EC: 3.6.5
UniProt
Find proteins for Q00582 (Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
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Entity ID: 3
MoleculeChains Sequence LengthOrganismDetailsImage
GTP-binding protein GTR2C [auth c]341Saccharomyces cerevisiaeMutation(s): 0 
Gene Names: GTR2, YGR163W
EC: 3.6.5
UniProt
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Entity ID: 4
MoleculeChains Sequence LengthOrganismDetailsImage
Nitrogen permease regulator 2D [auth T]615Saccharomyces cerevisiaeMutation(s): 0 
UniProt
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Entity ID: 5
MoleculeChains Sequence LengthOrganismDetailsImage
Nitrogen permease regulator 3E [auth h]1,146Saccharomyces cerevisiaeMutation(s): 0 
UniProt
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Entity ID: 6
MoleculeChains Sequence LengthOrganismDetailsImage
Vacuolar membrane-associated protein IML1F [auth X]1,584Saccharomyces cerevisiaeMutation(s): 0 
UniProt
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Entity ID: 7
MoleculeChains Sequence LengthOrganismDetailsImage
Protein MEH1G [auth R]184Saccharomyces cerevisiaeMutation(s): 0 
Gene Names: MEH1, EGO1, GSE2, YKR007W, YK106
UniProt
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Entity ID: 8
MoleculeChains Sequence LengthOrganismDetailsImage
Protein EGO2H [auth U]75Saccharomyces cerevisiaeMutation(s): 0 
Gene Names: EGO2, YCR075W-A
UniProt
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Entity ID: 9
MoleculeChains Sequence LengthOrganismDetailsImage
Protein SLM4I [auth Y]162Saccharomyces cerevisiaeMutation(s): 0 
Gene Names: SLM4, EGO3, GSE1, YBR077C, YBR0723
UniProt
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Experimental Data & Validation

Experimental Data

  • Method: ELECTRON MICROSCOPY
  • Resolution: 3.10 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 
EM Software:
TaskSoftware PackageVersion
RECONSTRUCTIONcryoSPARC
MODEL REFINEMENTPHENIX1.20

Structure Validation

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Entry History & Funding Information

Deposition Data

Funding OrganizationLocationGrant Number
European Research Council (ERC)European UnionAdG TENDO

Revision History  (Full details and data files)

  • Version 1.0: 2025-11-05
    Type: Initial release