Nanobody-based IgG formats as blocking antibodies of the major honeybee venom allergen Api m 1
Aagaard, J.B.To be published.
Experimental Data Snapshot
Starting Model: experimental
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Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Phospholipase A2 | 134 | Apis mellifera | Mutation(s): 0  EC: 3.1.1.4 | ||
UniProt | |||||
Find proteins for P00630 (Apis mellifera) Explore P00630  Go to UniProtKB:  P00630 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P00630 | ||||
Glycosylation | |||||
Glycosylation Sites: 1 | |||||
Sequence AnnotationsExpand | |||||
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Entity ID: 2 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
AM1-4 nanobody | 129 | Lama glama | Mutation(s): 0  | ||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
Sequence AnnotationsExpand | |||||
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Ligands 1 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
NAG (Subject of Investigation/LOI) Query on NAG | E [auth A], F [auth B] | 2-acetamido-2-deoxy-beta-D-glucopyranose C8 H15 N O6 OVRNDRQMDRJTHS-FMDGEEDCSA-N |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 93.6 | α = 90 |
b = 93.6 | β = 90 |
c = 189.49 | γ = 90 |
Software Name | Purpose |
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PHENIX | refinement |
PHENIX | refinement |
XDS | data reduction |
XSCALE | data scaling |
PHASER | phasing |
Funding Organization | Location | Grant Number |
---|---|---|
Danish Council for Independent Research | Denmark | 0135-00061B |