Annotations: 8PKC

Structure of Api m1 in complex with the AM1-4 nanobody

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
B	SCOP2B Superfamily	Phospholipase A2, PLA2	8038938	3001690	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	Phospholipase A2, PLA2	8038938	3001690	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
D	DNA_topoisoIV	e8pkcD1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: DNA_topoisoIV	ECOD (v295.2)
C	ubiquitin	e8pkcC01	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: ubiquitin	ECOD (v295.2)
B	DNA_topoisoIV	e8pkcB1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: DNA_topoisoIV	ECOD (v295.2)
A	DNA_topoisoIV	e8pkcA1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: DNA_topoisoIV	ECOD (v295.2)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B	PF05826	Phospholipase A2 (Phospholip_A2_2)	Phospholipase A2	This family consists of several phospholipase A2 like proteins mostly from insects [1].	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
C, D	AM1-4 nanobody	-	-	-
A, B	Phospholipase A2	cation binding ion binding binding calcium ion binding metal ion binding small molecule binding phospholipase activity A2-type glycerophospholipase activity hydrolase activity, acting on ester bonds glycerophospholipase activity carboxylic ester hydrolase activity hydrolase activity catalytic activity lipase activity	carboxylic acid transport secretion transport arachidonate transport lipid localization lipid transport establishment of localization organic acid transport localization arachidonate secretion monocarboxylic acid transport fatty acid transport icosanoid transport macromolecule localization carboxylic acid transport secretion transport arachidonate transport lipid localization lipid transport establishment of localization organic acid transport localization arachidonate secretion monocarboxylic acid transport fatty acid transport icosanoid transport macromolecule localization icosanoid secretion long-chain fatty acid transport phospholipid metabolic process organophosphate metabolic process metabolic process cellular process primary metabolic process phosphorus metabolic process lipid metabolic process	cellular anatomical structure extracellular region

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B	IPR036444	Phospholipase A2 domain superfamily	Homologous Superfamily
A, B	IPR033113	Phospholipase A2, histidine active site	Active Site
A, B	IPR016090	Phospholipase A2-like, central domain	Domain