8ONS

TAF15 amyloid fold in atypical FTLD - Individual 1

  • Classification: RNA BINDING PROTEIN
  • Organism(s): Homo sapiens
  • Expression System: Homo sapiens
  • Mutation(s): No 

  • Deposited: 2023-04-03 Released: 2023-12-06 
  • Deposition Author(s): Tetter, S., Ryskeldi-Falcon, B.
  • Funding Organization(s): Medical Research Council (MRC, United Kingdom), Alzheimers Research UK (ARUK), Swiss National Science Foundation, Leverhulme Trust

Experimental Data Snapshot

  • Method: ELECTRON MICROSCOPY
  • Resolution: 1.97 Å
  • Aggregation State: FILAMENT 
  • Reconstruction Method: HELICAL 

wwPDB Validation   3D Report Full Report


This is version 1.3 of the entry. See complete history


Literature

TAF15 amyloid filaments in frontotemporal lobar degeneration.

Tetter, S.Arseni, D.Murzin, A.G.Buhidma, Y.Peak-Chew, S.Y.Garringer, H.J.Newell, K.L.Vidal, R.Apostolova, L.G.Lashley, T.Ghetti, B.Ryskeldi-Falcon, B.

(2024) Nature 625: 345-351

  • DOI: https://doi.org/10.1038/s41586-023-06801-2
  • Primary Citation of Related Structures:  
    8ONS

  • PubMed Abstract: 

    Frontotemporal lobar degeneration (FTLD) causes frontotemporal dementia (FTD), the most common form of dementia after Alzheimer's disease, and is often also associated with motor disorders 1 . The pathological hallmarks of FTLD are neuronal inclusions of specific, abnormally assembled proteins 2 . In the majority of cases the inclusions contain amyloid filament assemblies of TAR DNA-binding protein 43 (TDP-43) or tau, with distinct filament structures characterizing different FTLD subtypes 3,4 . The presence of amyloid filaments and their identities and structures in the remaining approximately 10% of FTLD cases are unknown but are widely believed to be composed of the protein fused in sarcoma (FUS, also known as translocated in liposarcoma). As such, these cases are commonly referred to as FTLD-FUS. Here we used cryogenic electron microscopy (cryo-EM) to determine the structures of amyloid filaments extracted from the prefrontal and temporal cortices of four individuals with FTLD-FUS. Surprisingly, we found abundant amyloid filaments of the FUS homologue TATA-binding protein-associated factor 15 (TAF15, also known as TATA-binding protein-associated factor 2N) rather than of FUS itself. The filament fold is formed from residues 7-99 in the low-complexity domain (LCD) of TAF15 and was identical between individuals. Furthermore, we found TAF15 filaments with the same fold in the motor cortex and brainstem of two of the individuals, both showing upper and lower motor neuron pathology. The formation of TAF15 amyloid filaments with a characteristic fold in FTLD establishes TAF15 proteinopathy in neurodegenerative disease. The structure of TAF15 amyloid filaments provides a basis for the development of model systems of neurodegenerative disease, as well as for the design of diagnostic and therapeutic tools targeting TAF15 proteinopathy.


  • Organizational Affiliation

    MRC Laboratory of Molecular Biology, Cambridge, UK.


Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
TATA-binding protein-associated factor 2NA,
B [auth C],
C [auth E],
D [auth G],
E [auth I]
592Homo sapiensMutation(s): 0 
Gene Names: TAF15RBP56TAF2N
UniProt & NIH Common Fund Data Resources
Find proteins for Q92804 (Homo sapiens)
Explore Q92804 
Go to UniProtKB:  Q92804
PHAROS:  Q92804
GTEx:  ENSG00000270647 
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ92804
Sequence Annotations
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  • Reference Sequence
Experimental Data & Validation

Experimental Data

  • Method: ELECTRON MICROSCOPY
  • Resolution: 1.97 Å
  • Aggregation State: FILAMENT 
  • Reconstruction Method: HELICAL 

Structure Validation

View Full Validation Report



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
Medical Research Council (MRC, United Kingdom)United KingdomMC_UP_1201/25
Alzheimers Research UK (ARUK)United KingdomARUK-RS2019-001
Swiss National Science FoundationSwitzerlandP500PB_206890
Leverhulme TrustUnited KingdomECF-2022-610

Revision History  (Full details and data files)

  • Version 1.0: 2023-12-06
    Type: Initial release
  • Version 1.1: 2023-12-20
    Changes: Database references
  • Version 1.2: 2024-01-24
    Changes: Database references
  • Version 1.3: 2024-02-07
    Changes: Database references