8D8S

SufS from Staphylococcus aureus


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.39 Å
  • R-Value Free: 0.191 
  • R-Value Work: 0.168 

wwPDB Validation   3D Report Full Report


This is version 1.3 of the entry. See complete history


Literature

Structural and Biochemical Characterization of Staphylococcus aureus Cysteine Desulfurase Complex SufSU.

Hudspeth, J.D.Boncella, A.E.Sabo, E.T.Andrews, T.Boyd, J.M.Morrison, C.N.

(2022) ACS Omega 7: 44124-44133

  • DOI: https://doi.org/10.1021/acsomega.2c05576
  • Primary Citation of Related Structures:  
    8D8S

  • PubMed Abstract: 

    In this work, we provide the first in vitro characterization of two essential proteins from Staphylococcus aureus ( S . aureus ) involved in iron-sulfur (Fe-S) cluster biogenesis: the cysteine desulfurase SufS and the sulfurtransferase SufU. Together, these proteins form the transient SufSU complex and execute the first stage of Fe-S cluster biogenesis in the SUF-like pathway in Gram-positive bacteria. The proteins involved in the SUF-like pathway, such as SufS and SufU, are essential in Gram-positive bacteria since these bacteria tend to lack redundant Fe-S cluster biogenesis pathways. Most previous work characterizing the SUF-like pathway has focused on Bacillus subtilis ( B . subtilis ). We focus on the SUF-like pathway in S. aureus because of its potential to serve as a therapeutic target to treat S. aureus infections. Herein, we characterize S. aureus SufS ( Sa SufS) by X-ray crystallography and UV-vis spectroscopy, and we characterize S. aureus SufU ( Sa SufU) by a zinc binding fluorescence assay and small-angle X-ray scattering. We show that Sa SufS is a type II cysteine desulfurase and that Sa SufU is a Zn 2+ -containing sulfurtransferase. Additionally, we evaluated the cysteine desulfurase activity of the Sa SufSU complex and compared its activity to that of B. subtilis SufSU. Subsequent cross-species activity analysis reveals a surprising result: Sa SufS is significantly less stimulated by SufU than Bs SufS. Our results set a basis for further characterization of Sa SufSU as well as the development of new therapeutic strategies for treating infections caused by S. aureus by inhibiting the SUF-like pathway.


  • Organizational Affiliation

    Department of Chemistry, Colorado School of Mines, 1500 Illinois St, Golden, Colorado 80401, United States.


Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
Cysteine desulfurase414Staphylococcus aureusMutation(s): 0 
Gene Names: sufS
EC: 2.8.1.7
UniProt
Find proteins for A0A0H2XHJ5 (Staphylococcus aureus (strain USA300))
Explore A0A0H2XHJ5 
Go to UniProtKB:  A0A0H2XHJ5
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupA0A0H2XHJ5
Sequence Annotations
Expand
  • Reference Sequence
Small Molecules
Modified Residues  1 Unique
IDChains TypeFormula2D DiagramParent
LLP
Query on LLP
A
L-PEPTIDE LINKINGC14 H22 N3 O7 PLYS
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.39 Å
  • R-Value Free: 0.191 
  • R-Value Work: 0.168 
  • Space Group: P 32 2 1
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 93.853α = 90
b = 93.853β = 90
c = 101.461γ = 120
Software Package:
Software NamePurpose
REFMACrefinement
APEXdata reduction
APEXdata scaling
PHASERphasing

Structure Validation

View Full Validation Report



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
Not funded--

Revision History  (Full details and data files)

  • Version 1.0: 2022-12-07
    Type: Initial release
  • Version 1.1: 2022-12-28
    Changes: Database references
  • Version 1.2: 2023-10-25
    Changes: Data collection, Refinement description
  • Version 1.3: 2023-11-15
    Changes: Data collection