Biological Assembly 1  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A1 

Biological assembly 1 assigned by authors.

Biological Assembly Evidence: gel filtration

Macromolecule Content

• Total Structure Weight: 43.06 kDa 
• Atom Count: 2,881 
• Modelled Residue Count: 358 
• Deposited Residue Count: 378 
• Unique protein chains: 1

 8AHP

The crystal structure of the truncated form of Lotus japonicus kinase 1

• PDB DOI:  https://doi.org/10.2210/pdb8AHP/pdb

• Classification: TRANSFERASE
• Organism(s): Lotus japonicus
• Expression System: Escherichia coli BL21(DE3)
• Mutation(s): No 


• Deposited: 2022-07-22 Released: 2022-08-03 
• Deposition Author(s): Solovou, T., Leonidas, D.D.
• Funding Organization(s): Not funded

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Experimental Data Snapshot

• Method: X-RAY DIFFRACTION
• Resolution: 2.90 Å
• R-Value Free: 0.350 
• R-Value Work: 0.258 
• R-Value Observed: 0.267 

Literature

The crystal structure of the truncated form of Lotus japonicus kinase 1

Solovou, T., Leonidas, D.D.

To be published.

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Non-specific serine/threonine protein kinase	A	378	Lotus japonicus	Mutation(s): 0  EC: 2.7.11.1
UniProt
Find proteins for Q53VM1 (Lotus japonicus) Explore Q53VM1  Go to UniProtKB:  Q53VM1

Experimental Data & Validation

Experimental Data

• Method: X-RAY DIFFRACTION
• Resolution: 2.90 Å
• R-Value Free: 0.350 
• R-Value Work: 0.258 
• R-Value Observed: 0.267 
• Space Group: P 2₁ 2₁ 2₁

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 55.318	α = 90
b = 69.323	β = 90
c = 99.641	γ = 90

Software Package:

Software Name	Purpose
PHENIX	refinement
XDS	data reduction
Aimless	data scaling
MrBUMP	phasing

Structure Validation

Entry History & Funding Information

Deposition Data

• Released Date: 2022-08-03 
Deposition Author(s): Solovou, T., Leonidas, D.D.

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Funding Organization	Location	Grant Number
Not funded		--

Revision History  

• Version 1.0: 2022-08-03
  Type: Initial release