8THA | pdb_00008tha

1TEL, non-compressed, double-helical crystal form

• PDB DOI: https://doi.org/10.2210/pdb8THA/pdb

• Classification: TRANSCRIPTION
• Organism(s): Homo sapiens
• Expression System: Escherichia coli BL21(DE3)
• Mutation(s): Yes 


• Deposited: 2023-07-14 Released: 2023-08-23 
• Deposition Author(s): Smith, C.P., Wilson, E.W., Pedroza Romo, M.J., Averett, J.C., Moody, J.D.
• Funding Organization(s): National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)

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Experimental Data Snapshot

• Method: X-RAY DIFFRACTION
• Resolution: 1.68 Å
• R-Value Free: 
  0.215 (Depositor), 0.210 (DCC) 
• R-Value Work: 
  0.182 (Depositor), 0.180 (DCC) 

Starting Model: experimental

Literature

1TEL, non-compressed, double-helical crystal form

Smith, C.P., Wilson, E.W., Pedroza Romo, M.J., Averett, J.C., Moody, J.D.

To be published.

Biological Assembly 1  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A1 

Biological assembly 1 assigned by authors.

Macromolecule Content 

• Total Structure Weight: 18.89 kDa 
• Atom Count: 710 
• Modeled Residue Count: 77 
• Deposited Residue Count: 163 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Transcription factor ETV6,Activated CDC42 kinase 1	A	163	Homo sapiens	Mutation(s): 2  Gene Names: ETV6, TNK2 EC: 2.7.11.1 (UniProt), 2.7.10.2 (UniProt)
UniProt & NIH Common Fund Data Resources
Find proteins for P41212 (Homo sapiens) Explore P41212  Go to UniProtKB:  P41212
PHAROS:  P41212 GTEx:  ENSG00000139083
Find proteins for Q07912 (Homo sapiens) Explore Q07912  Go to UniProtKB:  Q07912
PHAROS:  Q07912 GTEx:  ENSG00000061938
UniProt Groups	P41212Q07912

Experimental Data & Validation

Experimental Data

• Method: X-RAY DIFFRACTION
• Resolution: 1.68 Å
• R-Value Free:  0.215 (Depositor), 0.210 (DCC) 
• R-Value Work:  0.182 (Depositor), 0.180 (DCC) 

Space Group: P 6₄

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 69.163	α = 90
b = 69.163	β = 90
c = 29.131	γ = 120

Software Package:

Software Name	Purpose
PHENIX	refinement
Coot	model building
autoPROC	data reduction
autoPROC	data scaling
PHASER	phasing

Structure Validation

Entry History & Funding Information

Deposition Data

• Released Date: 2023-08-23 
Deposition Author(s): Smith, C.P., Wilson, E.W., Pedroza Romo, M.J., Averett, J.C., Moody, J.D.

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Funding Organization	Location	Grant Number
National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)	United States	146209

Revision History  

• Version 1.0: 2023-08-23
  Type: Initial release