8PYM

Human IGF1R with inhibitor 54


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.65 Å
  • R-Value Free: 0.309 
  • R-Value Work: 0.236 

wwPDB Validation   3D Report Full Report


Ligand Structure Quality Assessment 


This is version 1.0 of the entry. See complete history


Literature

Human IGF1R with inhibitor 54

Dreyer, M.K.Wang, J.Elkins, J.M.

To be published.

Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
Insulin-like growth factor 1 receptor beta chainA [auth AAA]321Homo sapiensMutation(s): 0 
Gene Names: IGF1R
UniProt & NIH Common Fund Data Resources
Find proteins for P08069 (Homo sapiens)
Explore P08069 
Go to UniProtKB:  P08069
PHAROS:  P08069
GTEx:  ENSG00000140443 
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP08069
Sequence Annotations
Expand
  • Reference Sequence
Small Molecules
Ligands 3 Unique
IDChains Name / Formula / InChI Key2D Diagram3D Interactions
IED (Subject of Investigation/LOI)
Query on IED

Download Ideal Coordinates CCD File 
B [auth AAA]5,5-dimethyl-1-(1H-pyrrolo[2,3-b]pyridin-4-ylmethyl)-3-[4-(trifluoromethylsulfanyl)phenyl]imidazolidine-2,4-dione
C20 H17 F3 N4 O2 S
UULKZBGPNGIYOX-UHFFFAOYSA-N
CD
Query on CD

Download Ideal Coordinates CCD File 
D [auth AAA]CADMIUM ION
Cd
WLZRMCYVCSSEQC-UHFFFAOYSA-N
NI
Query on NI

Download Ideal Coordinates CCD File 
C [auth AAA]NICKEL (II) ION
Ni
VEQPNABPJHWNSG-UHFFFAOYSA-N
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.65 Å
  • R-Value Free: 0.309 
  • R-Value Work: 0.236 
  • Space Group: P 43 21 2
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 69.35α = 90
b = 69.35β = 90
c = 142.85γ = 90
Software Package:
Software NamePurpose
REFMACrefinement
XDSdata reduction
SCALAdata scaling
PHASERphasing

Structure Validation

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Ligand Structure Quality Assessment 


Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
Innovative Medicines InitiativeSwitzerlandK4DD

Revision History  (Full details and data files)

  • Version 1.0: 2023-09-20
    Type: Initial release